Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ABC810_RS01810 | Genome accession | NZ_CP155532 |
| Coordinates | 343910..344305 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282443.1 | Uniprot ID | A0A0E8PDH7 |
| Organism | Streptococcus pneumoniae strain SP264 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 338910..349305
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC810_RS01760 (ABC810_01760) | - | 339035..339397 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| ABC810_RS01765 (ABC810_01765) | - | 339394..339897 (+) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| ABC810_RS01770 (ABC810_01770) | - | 340011..340457 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| ABC810_RS01775 (ABC810_01775) | - | 340463..341137 (+) | 675 | WP_000725749.1 | membrane protein | - |
| ABC810_RS01780 (ABC810_01780) | - | 341298..341489 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| ABC810_RS01785 (ABC810_01785) | - | 341514..341576 (+) | 63 | WP_219300018.1 | hypothetical protein | - |
| ABC810_RS01790 (ABC810_01790) | - | 341774..342073 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| ABC810_RS01795 (ABC810_01795) | - | 342070..342387 (+) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| ABC810_RS01800 (ABC810_01800) | ytpR | 342403..343029 (+) | 627 | WP_000578313.1 | YtpR family tRNA-binding protein | - |
| ABC810_RS01805 (ABC810_01805) | - | 343071..343832 (+) | 762 | WP_001107758.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ABC810_RS01810 (ABC810_01810) | ssbB/cilA | 343910..344305 (+) | 396 | WP_000282443.1 | single-stranded DNA-binding protein | Machinery gene |
| ABC810_RS01815 (ABC810_01815) | groES | 344461..344745 (+) | 285 | WP_000917299.1 | co-chaperone GroES | - |
| ABC810_RS01820 (ABC810_01820) | groL | 344761..346383 (+) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| ABC810_RS01825 (ABC810_01825) | - | 346482..347808 (-) | 1327 | Protein_330 | ISL3 family transposase | - |
| ABC810_RS01830 (ABC810_01830) | - | 347968..348174 (+) | 207 | WP_000775827.1 | transcriptional regulator | - |
| ABC810_RS01835 (ABC810_01835) | - | 348532..349065 (-) | 534 | WP_000775323.1 | DUF402 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14935.91 Da Isoelectric Point: 5.9409
>NTDB_id=997096 ABC810_RS01810 WP_000282443.1 343910..344305(+) (ssbB/cilA) [Streptococcus pneumoniae strain SP264]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=997096 ABC810_RS01810 WP_000282443.1 343910..344305(+) (ssbB/cilA) [Streptococcus pneumoniae strain SP264]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
96.947 |
100 |
0.969 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |