Detailed information NTG0997073

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EL018_RS21485
• Genome accession: NZ_LR134082
• Coordinates: 4438105..4439130 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NCTC9038
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4433105..4444130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL018_RS21465 (NCTC9038_04330)	metJ	4434167..4434484 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EL018_RS21470 (NCTC9038_04331)	yiiX	4434631..4435275 (+)	645	WP_126493647.1	YiiX family permuted papain-like enzyme	-
EL018_RS21475 (NCTC9038_04332)	rpmE	4435336..4435548 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EL018_RS21480 (NCTC9038_04333)	priA	4435751..4437949 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
EL018_RS21485 (NCTC9038_04334)	cytR	4438105..4439130 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EL018_RS21490 (NCTC9038_04335)	ftsN	4439222..4440181 (+)	960	WP_000068828.1	cell division protein FtsN	-
EL018_RS21495 (NCTC9038_04336)	hslV	4440274..4440804 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EL018_RS21500 (NCTC9038_04337)	hslU	4440814..4442145 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EL018_RS21505 (NCTC9038_04338)	menA	4442212..4443138 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EL018_RS21510 (NCTC9038_04339)	rraA	4443231..4443716 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EL018_RS21515 (NCTC9038_04340)	zapB	4443801..4444046 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=997073 EL018_RS21485 WP_000644904.1 4438105..4439130(+) (cytR) [Escherichia coli strain NCTC9038]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=997073 EL018_RS21485 WP_000644904.1 4438105..4439130(+) (cytR) [Escherichia coli strain NCTC9038]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628