Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GZL_RS18740 Genome accession   NZ_CP003987
Coordinates   4491022..4492755 (-) Length   577 a.a.
NCBI ID   WP_039633965.1    Uniprot ID   -
Organism   Streptomyces sp. 769     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4486022..4497755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GZL_RS18725 (GZL_04134) - 4486284..4487309 (-) 1026 WP_039633959.1 LacI family DNA-binding transcriptional regulator -
  GZL_RS18730 (GZL_04135) - 4487334..4488176 (-) 843 WP_039633961.1 response regulator transcription factor -
  GZL_RS18735 (GZL_04137) rcrQ 4489019..4491025 (-) 2007 WP_039633963.1 ABC transporter ATP-binding protein Regulator
  GZL_RS18740 (GZL_04138) rcrP 4491022..4492755 (-) 1734 WP_039633965.1 ABC transporter ATP-binding protein Regulator
  GZL_RS18745 (GZL_04139) - 4492887..4493189 (+) 303 WP_203232704.1 MoaD/ThiS family protein -
  GZL_RS18750 (GZL_04140) - 4493200..4494417 (+) 1218 WP_039633969.1 hypothetical protein -
  GZL_RS18755 (GZL_04141) - 4494616..4495317 (+) 702 WP_039633971.1 DUF2993 domain-containing protein -
  GZL_RS18760 (GZL_04142) - 4495846..4496691 (+) 846 WP_039633973.1 sulfurtransferase -
  GZL_RS18765 (GZL_04143) - 4496736..4497023 (+) 288 WP_039633975.1 DUF1416 domain-containing protein -
  GZL_RS18770 (GZL_04144) - 4497193..4497492 (+) 300 WP_078875802.1 DUF3099 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62831.44 Da        Isoelectric Point: 8.2273

>NTDB_id=99701 GZL_RS18740 WP_039633965.1 4491022..4492755(-) (rcrP) [Streptomyces sp. 769]
MLVRLARAHLRPYRRSISLIVLLQLIQTLATLYLPTLNADIIDKGVVAGDTGYIFRIGGFMIAVTVLQIACAIGAVYFGA
RTAMALGRDIRAAVFDRVQSFSAREVGRFGAPSLITRTTNDVQQVQMLVLMTFTMMVSAPIMCVGGIAMALNQDVPLSAL
LLVIVPVLGILVSLIVRRMRPLFRGVQERIDTVNRVLREQIAGIRVIRAFVRDRYERERFAGANTDLYDISIRAGRLMSM
MFPLVMLIVNLSSVAVVWLGGLRIDAKEMEIGALTAFLSYLMYILMSIMMATFMVMMLPRAEVCAERIQEVLATESSVTP
PTAPVSTLRRHGELELRDVEFRFPGAEQPVLKDISLTARPGETTAVIGSTGSGKSTLLGLVPRLFDATGGTVLVDGEDVR
TLAPETLAAVIGLVPQKPYLFSGTVASNLRYGNPDATGDELWHALETAQARDFVARMEGGLDAPIAQGGTNVSGGQRQRL
AIARALVRKPEIYLFDDSFSALDYATDAALRAALARETDRATVVIVAQRVSTIRGADRIVVLDEGRIVGTGTHSELMAGN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=99701 GZL_RS18740 WP_039633965.1 4491022..4492755(-) (rcrP) [Streptomyces sp. 769]
GTGTTGGTCCGACTCGCGCGGGCGCATCTGCGGCCCTATAGGCGCTCCATATCCCTGATCGTCCTGCTCCAGCTGATACA
GACGCTGGCCACGCTCTATCTGCCGACCCTCAACGCCGACATCATCGACAAGGGTGTCGTGGCGGGCGACACGGGCTACA
TCTTCCGCATCGGCGGCTTCATGATCGCGGTGACGGTGCTCCAGATCGCCTGCGCGATCGGCGCGGTGTACTTCGGCGCC
CGCACGGCCATGGCGCTGGGCCGGGACATCCGGGCCGCGGTCTTCGACCGGGTGCAGTCGTTCTCCGCCCGGGAGGTGGG
ACGCTTCGGCGCGCCGTCGCTGATCACCCGCACCACCAACGACGTCCAGCAGGTCCAGATGCTGGTCCTGATGACGTTCA
CGATGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGCATTGCCATGGCGCTCAACCAGGACGTGCCGCTGTCGGCGCTC
CTCCTGGTCATCGTCCCGGTCCTCGGGATCCTCGTCTCACTGATCGTGCGCCGGATGCGTCCGCTGTTCCGCGGCGTGCA
GGAGCGCATCGACACCGTCAACCGCGTGCTGCGCGAGCAGATCGCCGGCATCCGCGTCATCCGCGCCTTCGTCCGCGACC
GGTACGAGCGGGAGCGGTTCGCCGGGGCCAACACCGATCTCTACGACATCTCGATCCGCGCCGGCCGGCTGATGTCGATG
ATGTTCCCGCTGGTCATGCTGATCGTGAACCTCTCCAGCGTGGCCGTGGTCTGGCTCGGCGGGCTGCGCATCGACGCCAA
GGAGATGGAGATCGGGGCGCTGACGGCCTTCCTCAGCTACCTGATGTACATCCTGATGTCGATCATGATGGCGACGTTCA
TGGTGATGATGCTGCCGCGCGCCGAGGTCTGCGCCGAGCGCATCCAGGAGGTGCTGGCGACCGAGTCCAGCGTCACCCCG
CCCACCGCACCGGTCAGCACGCTGCGCCGGCACGGCGAACTGGAGCTCCGGGACGTGGAGTTCCGCTTCCCCGGCGCCGA
GCAGCCGGTCCTGAAGGACATCTCCCTGACCGCCCGCCCCGGCGAGACCACCGCCGTCATCGGCTCCACCGGCTCCGGCA
AGTCCACCCTCCTCGGGCTGGTGCCCCGGCTCTTCGACGCCACCGGCGGCACGGTCCTGGTCGACGGCGAGGACGTGCGC
ACCCTGGCCCCGGAGACGCTGGCCGCCGTGATCGGCCTGGTGCCGCAGAAGCCGTACCTCTTCTCCGGCACGGTCGCCAG
CAACCTGCGGTACGGCAACCCGGACGCCACCGGCGACGAGCTGTGGCACGCCCTGGAGACCGCGCAGGCCCGGGACTTCG
TCGCGCGGATGGAGGGCGGCCTGGACGCGCCGATCGCGCAAGGGGGCACCAACGTCTCCGGCGGTCAGCGGCAGCGCCTG
GCGATCGCCCGCGCCCTGGTCCGCAAGCCGGAGATCTACCTCTTCGACGACTCCTTCTCGGCCCTGGACTACGCCACCGA
CGCGGCCCTGCGCGCCGCGCTGGCCCGGGAGACCGACCGGGCCACCGTGGTGATCGTCGCCCAGCGGGTCTCGACGATCC
GCGGCGCCGACCGGATCGTGGTCCTGGACGAGGGCCGGATCGTGGGCACCGGCACCCACAGCGAGTTGATGGCCGGCAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.179

97.054

0.39

Multiple sequence alignment