Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GZL_RS18735 Genome accession   NZ_CP003987
Coordinates   4489019..4491025 (-) Length   668 a.a.
NCBI ID   WP_039633963.1    Uniprot ID   -
Organism   Streptomyces sp. 769     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4484019..4496025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GZL_RS18715 (GZL_04132) - 4484159..4484899 (-) 741 WP_039633955.1 response regulator transcription factor -
  GZL_RS18720 (GZL_04133) - 4485051..4486166 (-) 1116 WP_039633957.1 trypsin-like peptidase domain-containing protein -
  GZL_RS18725 (GZL_04134) - 4486284..4487309 (-) 1026 WP_039633959.1 LacI family DNA-binding transcriptional regulator -
  GZL_RS18730 (GZL_04135) - 4487334..4488176 (-) 843 WP_039633961.1 response regulator transcription factor -
  GZL_RS18735 (GZL_04137) rcrQ 4489019..4491025 (-) 2007 WP_039633963.1 ABC transporter ATP-binding protein Regulator
  GZL_RS18740 (GZL_04138) rcrP 4491022..4492755 (-) 1734 WP_039633965.1 ABC transporter ATP-binding protein Regulator
  GZL_RS18745 (GZL_04139) - 4492887..4493189 (+) 303 WP_203232704.1 MoaD/ThiS family protein -
  GZL_RS18750 (GZL_04140) - 4493200..4494417 (+) 1218 WP_039633969.1 hypothetical protein -
  GZL_RS18755 (GZL_04141) - 4494616..4495317 (+) 702 WP_039633971.1 DUF2993 domain-containing protein -

Sequence

Protein


Download         Length: 668 a.a.        Molecular weight: 71787.63 Da        Isoelectric Point: 6.9021

>NTDB_id=99700 GZL_RS18735 WP_039633963.1 4489019..4491025(-) (rcrQ) [Streptomyces sp. 769]
MTTADKQGPATDRAPEAPASAPRRGPAPGGGPMARMMGGPIDKSLNFKGSGKRLLAQMRPERGLITVALLLGVLSVALTV
VGPKVLGRATDLIMAGIVGRDLPAGLTKEQAADLLRAHGQGGLADLVASMPVAPGPHTDFGAVGLVLLFVALIYAGSSVF
GFVQARIATRVVQRTVFRLREQVEEKLARLPLSYFDKQQRGEVLSRATNDIDNIQQTLQQTLSQIVASLLTIVGVLGMMF
WISWLLALVALVTVPVSVVVATKVGKRAQPQFVQQWKTTGKLNAHIEEMYTGHSLVKVFGREKESAALFREQNDALHSAG
FKAQFISGIIQPAMMFIGNLNYVLVAVVGGLRVASGALSIGDVQAFVQYSRQFSQPLTQVASMANLVQSGVASAERVFEL
LDAKEQHPDAERPARPEQVTGRVAFEGVSFRYDENKPLIEDLSLSVRPGQTVAIVGPTGAGKTTLVNLLMRFYEVRDGRI
TLDGVDIAEMSREELRGHIGMVLQDTWLFGGTIAENIAYGAPEGISRDKVVEAARATHVDRFVRTLPDGYDTVIEEEGAN
VSVGEKQLITIARAFLAEPAILVLDEATSSVDTRTEVLIQHAMAQLRSGRTSFVIAHRLSTIRDADLILVMENGSIVEQG
THDTLLSANGAYARLYAAQFAEAVTEAG

Nucleotide


Download         Length: 2007 bp        

>NTDB_id=99700 GZL_RS18735 WP_039633963.1 4489019..4491025(-) (rcrQ) [Streptomyces sp. 769]
ATGACCACCGCGGACAAACAGGGCCCGGCCACCGACCGGGCCCCGGAGGCCCCCGCGTCGGCCCCCCGCCGCGGCCCGGC
CCCCGGCGGCGGTCCGATGGCCCGCATGATGGGCGGCCCGATCGACAAGTCCTTGAACTTCAAGGGCTCCGGCAAGCGGC
TGTTGGCCCAGATGCGGCCGGAGCGCGGCCTCATCACGGTCGCGCTGCTGCTCGGCGTGCTCAGCGTGGCGCTGACCGTC
GTCGGCCCCAAGGTGCTGGGCCGGGCCACCGACCTGATCATGGCCGGCATCGTCGGCCGCGACCTGCCCGCGGGGCTGAC
CAAGGAGCAGGCCGCCGACCTGCTGCGGGCGCACGGCCAGGGCGGGCTCGCGGACCTGGTCGCCAGCATGCCGGTGGCCC
CCGGCCCGCACACCGACTTCGGCGCGGTGGGCCTGGTCCTGCTCTTCGTCGCGCTGATCTACGCCGGCTCGTCCGTCTTC
GGCTTCGTCCAGGCCCGGATCGCCACCCGCGTCGTGCAGCGCACCGTCTTCCGGCTGCGCGAGCAGGTCGAGGAGAAGCT
CGCCCGGCTGCCGCTGAGCTACTTCGACAAGCAGCAGCGCGGCGAGGTGCTCTCCCGCGCCACCAACGACATCGACAACA
TCCAGCAGACGCTCCAGCAGACCCTCAGCCAGATAGTGGCCTCGCTGCTGACGATCGTGGGCGTGCTGGGCATGATGTTC
TGGATCTCCTGGCTGCTGGCCCTGGTCGCCCTGGTCACGGTCCCGGTCTCGGTCGTCGTCGCCACCAAGGTCGGCAAGCG
CGCCCAGCCGCAGTTCGTCCAGCAGTGGAAGACCACCGGCAAGCTCAACGCGCACATCGAGGAGATGTACACCGGCCACT
CCCTGGTCAAGGTCTTCGGCCGGGAGAAGGAGTCCGCCGCGCTGTTCCGCGAGCAGAACGACGCGCTCCACTCCGCGGGC
TTCAAGGCCCAGTTCATCTCCGGCATCATCCAGCCCGCGATGATGTTCATCGGCAACCTCAACTACGTCCTGGTGGCCGT
GGTCGGCGGCCTGCGCGTCGCCTCCGGCGCGCTGTCCATCGGCGACGTCCAGGCGTTCGTCCAGTACAGCCGCCAGTTCA
GCCAGCCGCTGACCCAGGTCGCCTCGATGGCCAACCTCGTCCAGTCCGGTGTGGCCTCCGCCGAGCGGGTCTTCGAACTC
CTCGACGCCAAGGAGCAGCACCCCGACGCCGAGCGGCCCGCCCGCCCGGAGCAGGTCACCGGCCGGGTCGCCTTCGAGGG
CGTCTCCTTCCGCTACGACGAGAACAAGCCGCTCATCGAGGACCTCTCGCTGTCCGTCCGCCCCGGCCAGACCGTCGCCA
TCGTCGGCCCGACCGGCGCCGGCAAGACCACCCTGGTCAACCTCCTGATGCGGTTCTACGAGGTCCGCGACGGCCGGATC
ACCCTCGACGGCGTGGACATCGCGGAGATGTCCCGCGAGGAGCTGCGCGGCCACATCGGCATGGTCCTCCAGGACACCTG
GCTCTTCGGCGGCACCATCGCCGAGAACATCGCCTACGGCGCCCCCGAGGGGATCTCCCGCGACAAGGTCGTCGAGGCCG
CCAGGGCCACCCACGTCGACCGCTTCGTCCGCACCCTCCCCGACGGCTACGACACCGTCATCGAGGAGGAGGGCGCCAAC
GTCTCGGTGGGTGAGAAGCAGCTCATCACCATCGCCCGGGCCTTCCTCGCCGAGCCGGCCATCCTCGTCCTGGACGAGGC
CACCAGCTCGGTCGACACCCGCACCGAGGTGCTGATCCAGCACGCCATGGCCCAACTCCGCAGCGGCCGCACCAGCTTCG
TCATCGCGCACCGCCTCTCCACCATCCGGGACGCCGACCTCATCCTGGTGATGGAGAACGGCTCGATCGTCGAACAGGGC
ACCCACGACACCCTGTTGTCCGCGAACGGTGCCTACGCCCGCCTGTACGCGGCCCAGTTCGCGGAGGCGGTGACGGAGGC
GGGGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(440-589)

ABC transporter transmembrane region (ABC_membrane)

(66-377)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.491

92.365

0.383

Multiple sequence alignment