Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABC803_RS00165 Genome accession   NZ_CP155531
Coordinates   18173..18931 (-) Length   252 a.a.
NCBI ID   WP_000410376.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain SN36255     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 13173..23931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC803_RS00140 (ABC803_00140) - 13305..13556 (+) 252 WP_000644292.1 hypothetical protein -
  ABC803_RS00145 (ABC803_00145) - 14175..14594 (+) 420 WP_000187319.1 DUF1492 domain-containing protein -
  ABC803_RS00150 (ABC803_00150) - 15045..15239 (-) 195 WP_061635955.1 DUF951 family protein -
  ABC803_RS00155 (ABC803_00155) dnaN 15304..16440 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  ABC803_RS00160 (ABC803_00160) dnaA 16599..17960 (-) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  ABC803_RS00165 (ABC803_00165) spo0J 18173..18931 (-) 759 WP_000410376.1 ParB/RepB/Spo0J family partition protein Regulator
  ABC803_RS00170 (ABC803_00170) htrA 18989..20170 (-) 1182 WP_000681597.1 trypsin-like peptidase domain-containing protein Regulator
  ABC803_RS00175 (ABC803_00175) rlmH 20353..20832 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABC803_RS00185 (ABC803_00185) comC/comC1 21114..21239 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  ABC803_RS00190 (ABC803_00190) comD/comD1 21260..22585 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  ABC803_RS00195 (ABC803_00195) comE 22582..23334 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29130.48 Da        Isoelectric Point: 8.0022

>NTDB_id=996989 ABC803_RS00165 WP_000410376.1 18173..18931(-) (spo0J) [Streptococcus pneumoniae strain SN36255]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEACAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=996989 ABC803_RS00165 WP_000410376.1 18173..18931(-) (spo0J) [Streptococcus pneumoniae strain SN36255]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCATG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504

Multiple sequence alignment