Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AAH687_RS18380 Genome accession   NZ_CP155530
Coordinates   3574340..3575290 (-) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain TN5S8     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3569340..3580290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS18350 (AAH687_18350) - 3569615..3569977 (+) 363 WP_017360224.1 hypothetical protein -
  AAH687_RS18355 (AAH687_18355) - 3570064..3570498 (+) 435 WP_008348634.1 hypothetical protein -
  AAH687_RS18360 (AAH687_18360) - 3570533..3571489 (-) 957 WP_048001719.1 LCP family protein -
  AAH687_RS18365 (AAH687_18365) - 3571681..3572625 (-) 945 WP_125589106.1 siderophore ABC transporter substrate-binding protein -
  AAH687_RS18370 (AAH687_18370) - 3572648..3573406 (-) 759 WP_056705126.1 ATP-binding cassette domain-containing protein -
  AAH687_RS18375 (AAH687_18375) - 3573397..3574347 (-) 951 WP_008348643.1 iron chelate uptake ABC transporter family permease subunit -
  AAH687_RS18380 (AAH687_18380) ceuB 3574340..3575290 (-) 951 WP_017366964.1 ABC transporter permease Machinery gene
  AAH687_RS18385 (AAH687_18385) - 3575448..3575726 (-) 279 WP_019743339.1 barstar family protein -
  AAH687_RS18390 (AAH687_18390) - 3575789..3576958 (-) 1170 WP_076821936.1 MFS transporter -
  AAH687_RS18395 (AAH687_18395) - 3577102..3578541 (+) 1440 WP_019743338.1 PLP-dependent aminotransferase family protein -
  AAH687_RS18400 (AAH687_18400) - 3578572..3579054 (-) 483 WP_008348662.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=996984 AAH687_RS18380 WP_017366964.1 3574340..3575290(-) (ceuB) [Bacillus altitudinis strain TN5S8]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=996984 AAH687_RS18380 WP_017366964.1 3574340..3575290(-) (ceuB) [Bacillus altitudinis strain TN5S8]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTACAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment