Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAH687_RS17995 Genome accession   NZ_CP155530
Coordinates   3493800..3493997 (-) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain TN5S8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3488800..3498997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS17970 (AAH687_17970) - 3488970..3489950 (-) 981 WP_008348498.1 ABC transporter ATP-binding protein -
  AAH687_RS17975 (AAH687_17975) - 3490121..3490915 (-) 795 WP_008348499.1 DUF2268 domain-containing protein -
  AAH687_RS17980 (AAH687_17980) fabF 3490993..3492234 (-) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  AAH687_RS17985 (AAH687_17985) - 3492256..3493194 (-) 939 WP_007499042.1 beta-ketoacyl-ACP synthase III -
  AAH687_RS17990 (AAH687_17990) - 3493364..3493597 (+) 234 WP_108611364.1 hypothetical protein -
  AAH687_RS17995 (AAH687_17995) comZ 3493800..3493997 (-) 198 WP_008348507.1 ComZ family protein Regulator
  AAH687_RS18000 (AAH687_18000) med 3494009..3494974 (-) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  AAH687_RS18005 (AAH687_18005) - 3495065..3495640 (-) 576 WP_061418679.1 hypothetical protein -
  AAH687_RS18010 (AAH687_18010) - 3495716..3496456 (-) 741 WP_007499048.1 hypothetical protein -
  AAH687_RS18015 (AAH687_18015) - 3496669..3496863 (+) 195 WP_008348514.1 YjzD family protein -
  AAH687_RS18020 (AAH687_18020) - 3496983..3498248 (-) 1266 WP_008348516.1 MFS transporter -
  AAH687_RS18025 (AAH687_18025) - 3498418..3498597 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=996980 AAH687_RS17995 WP_008348507.1 3493800..3493997(-) (comZ) [Bacillus altitudinis strain TN5S8]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=996980 AAH687_RS17995 WP_008348507.1 3493800..3493997(-) (comZ) [Bacillus altitudinis strain TN5S8]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCACTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment