Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   AAH687_RS17875 Genome accession   NZ_CP155530
Coordinates   3467630..3469456 (-) Length   608 a.a.
NCBI ID   WP_283775701.1    Uniprot ID   -
Organism   Bacillus altitudinis strain TN5S8     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 3462630..3474456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS17840 (AAH687_17840) - 3462678..3463307 (-) 630 WP_008348457.1 GTP pyrophosphokinase family protein -
  AAH687_RS17845 (AAH687_17845) - 3463341..3463706 (-) 366 WP_008348459.1 hypothetical protein -
  AAH687_RS17850 (AAH687_17850) - 3463924..3464499 (+) 576 WP_076821872.1 CYTH domain-containing protein -
  AAH687_RS17855 (AAH687_17855) - 3464525..3465289 (+) 765 WP_008348461.1 lytic transglycosylase domain-containing protein -
  AAH687_RS17860 (AAH687_17860) - 3465567..3465965 (+) 399 WP_007499001.1 thiol management oxidoreductase -
  AAH687_RS17865 (AAH687_17865) - 3465962..3466873 (+) 912 WP_007499002.1 ClpXP adapter SpxH family protein -
  AAH687_RS17870 (AAH687_17870) - 3467170..3467343 (+) 174 WP_008348466.1 hypothetical protein -
  AAH687_RS17875 (AAH687_17875) pepF 3467630..3469456 (-) 1827 WP_283775701.1 oligoendopeptidase F Regulator
  AAH687_RS17880 (AAH687_17880) - 3469671..3470831 (-) 1161 WP_029575385.1 competence protein CoiA family protein -
  AAH687_RS17885 (AAH687_17885) cls 3470995..3472515 (-) 1521 WP_008348473.1 cardiolipin synthase -
  AAH687_RS17890 (AAH687_17890) mecA 3472601..3473266 (-) 666 WP_008348474.1 adaptor protein MecA Regulator
  AAH687_RS17895 (AAH687_17895) - 3473531..3474196 (+) 666 WP_007499010.1 TerC family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70283.00 Da        Isoelectric Point: 5.4453

>NTDB_id=996976 AAH687_RS17875 WP_283775701.1 3467630..3469456(-) (pepF) [Bacillus altitudinis strain TN5S8]
MTSQNNNNHLPDRSEVKEENKWRLEDIFESVDSWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDQLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSTSSTTFSMFNNADISFPSVKDENGKEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYKNTLAST
LSGSIKKDNFYAKVRHYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLEDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGDGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILEEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTGE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=996976 AAH687_RS17875 WP_283775701.1 3467630..3469456(-) (pepF) [Bacillus altitudinis strain TN5S8]
ATGACTTCACAAAATAACAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGCCTTGAAGATAT
TTTTGAAAGTGTCGATTCTTGGAATAAGGAATTCGAAGCTGTAAAAAAAGAAATTCCGAAGCTCGCCCAATTTAAAGGCA
AGCTGGCCCATTCTGCTGATGTCTTGTATGAAGCCCTAACATTTCAGGATCAACTTTCTGAAAAGCTTGGCAAGCTTTAT
ACATATGCGCATATGAAATATGATGAAGATACAACAAATTCATCATTTCAGGCTTTAAATGATAAAGCATCCAATTTATT
TACACAGCTGTCTAGTACATCTGCCTATATTGTTCCGGAAATTTTATCTATTCAAGAAGATAAGCTGCAGCAATTCATTT
TGGAAAAAGAAGAATTAAAACTTTATTCTCACGCTCTCGAAGAAATTAACAAGGAGCGTCCGCATATTTTAAGTGAAGAG
CAAGAAGCTTTATTAGCTGAAGCCTCTGAACCTTTATCAACATCATCCACTACGTTTAGTATGTTTAATAATGCAGATAT
TTCGTTCCCTTCTGTTAAGGATGAAAATGGAAAAGAAAAGAAAATTACTCATGGCAACTTCATTACCTTTTTAAACAGTG
ATGATCGTGAAGTGAGAAAGAATGCTTTTAAAGCCGTTTATAAAACGTATGATCAATATAAGAATACTTTGGCGTCTACA
CTCAGCGGCTCGATTAAAAAGGATAATTTTTATGCGAAAGTACGTCATTACAAATCTGCAAGAGAAGCAGCGTTATCACG
CAACAGTATTCCTGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACACCGCTACATTG
AATTGCGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTATGACTTGTATACACCATTAGTAAAAGATGCTGGCATG
AAGCTGACCTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCGCCATTAGGAGAAGAATATGTTTCGGTATTAAA
AGAGGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGCGCGTATTCTTCTGGAAGCTATG
GTACGAATCCTTATATCTTAATGAACTGGCAAAATAATATTGATAATTTATTTACGCTGGCTCATGAATTTGGTCACTCT
GTTCATAGCTACTATACAAGAAAGCATCAGCCATATCCGTACGGAAACTACAGTATTTTTGTAGCGGAAGTAGCTTCTAC
AACAAATGAAGCATTACTAGGTGAATATTTACTGAATCATTTAGAGGACAAAAAGCAGCGCTTGTATGTGCTCAATCATT
TGTTAGAAGGATTTAGAGGGACGGTATTCAGACAAACGATGTTTGCAGAGTTCGAGCACCTGATTCATGTGAAAGCGCAA
GAAGGGGAGGCATTAACGCCAGAGTTTATGACGAACCTGTATTACGACCTGAATAAGAAGTATTTTGGCGACGGTATGGT
TGTGGATAAGGAAATCGGATTAGAATGGACCCGAATTCCGCATTTCTATTACAACTATTATGTGTATCAATATGCGACAG
GCTATAGTGCGGCTCAGGCATTAAGTAAACAAATTTTAGAAGAAGGGAAACCTGCAGTGGAGCGCTATACAGACTTCCTT
AAAGCAGGAAGCTCTGACTATCCAATTAACGTGCTGAAAAAAGCTGGTGTAGATATGGCATCAAAAGAACCAATTGAGGC
AGCATGTCAATTGTTTGAAGAAAAATTAAAGGAAATGGAAGAGCTCATCTCAAAGACTGGTGAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.158

97.697

0.48

Multiple sequence alignment