Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AAH687_RS16765 Genome accession   NZ_CP155530
Coordinates   3267778..3268239 (+) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain TN5S8     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3262778..3273239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS16735 (AAH687_16735) - 3263223..3264080 (+) 858 WP_138825674.1 metallophosphoesterase -
  AAH687_RS16740 (AAH687_16740) - 3264237..3264734 (+) 498 WP_019743906.1 L,D-transpeptidase family protein -
  AAH687_RS16745 (AAH687_16745) - 3264808..3266085 (+) 1278 WP_046343422.1 MFS transporter -
  AAH687_RS16750 (AAH687_16750) - 3266310..3266486 (-) 177 WP_164071367.1 hypothetical protein -
  AAH687_RS16755 (AAH687_16755) - 3266652..3266867 (+) 216 WP_008348016.1 hypothetical protein -
  AAH687_RS16760 (AAH687_16760) - 3267033..3267464 (-) 432 WP_019743908.1 hypothetical protein -
  AAH687_RS16765 (AAH687_16765) kre 3267778..3268239 (+) 462 WP_007498684.1 YkyB family protein Regulator
  AAH687_RS16770 (AAH687_16770) - 3268478..3269386 (-) 909 WP_008348035.1 chemotaxis protein -
  AAH687_RS16775 (AAH687_16775) - 3269460..3270770 (-) 1311 WP_138825668.1 MFS transporter -
  AAH687_RS16780 (AAH687_16780) - 3270896..3271435 (-) 540 WP_346394635.1 RDD family protein -
  AAH687_RS16785 (AAH687_16785) - 3271736..3271888 (+) 153 WP_017367142.1 hypothetical protein -
  AAH687_RS16790 (AAH687_16790) - 3271953..3272837 (-) 885 WP_017359428.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=996972 AAH687_RS16765 WP_007498684.1 3267778..3268239(+) (kre) [Bacillus altitudinis strain TN5S8]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=996972 AAH687_RS16765 WP_007498684.1 3267778..3268239(+) (kre) [Bacillus altitudinis strain TN5S8]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment