Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAH687_RS16640 Genome accession   NZ_CP155530
Coordinates   3248574..3249155 (-) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain TN5S8     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3243574..3254155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS16610 (AAH687_16610) - 3243606..3244097 (-) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -
  AAH687_RS16615 (AAH687_16615) mobB 3244090..3244617 (-) 528 WP_008345163.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAH687_RS16620 (AAH687_16620) glp 3244599..3245873 (-) 1275 WP_048001602.1 gephyrin-like molybdotransferase Glp -
  AAH687_RS16625 (AAH687_16625) - 3245883..3246899 (-) 1017 WP_041092414.1 MoeB/ThiF family adenylyltransferase -
  AAH687_RS16630 (AAH687_16630) - 3246929..3247510 (-) 582 WP_072367702.1 molybdenum cofactor guanylyltransferase -
  AAH687_RS16635 (AAH687_16635) - 3247594..3248511 (+) 918 WP_008345172.1 hypothetical protein -
  AAH687_RS16640 (AAH687_16640) rok 3248574..3249155 (-) 582 WP_007498648.1 hypothetical protein Regulator
  AAH687_RS16645 (AAH687_16645) - 3249637..3250095 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  AAH687_RS16650 (AAH687_16650) ahpA 3250372..3250914 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  AAH687_RS16655 (AAH687_16655) - 3251186..3251995 (+) 810 WP_008347975.1 mechanosensitive ion channel family protein -
  AAH687_RS16660 (AAH687_16660) - 3252020..3252262 (-) 243 WP_003211408.1 YkuS family protein -
  AAH687_RS16665 (AAH687_16665) - 3252313..3253491 (-) 1179 WP_046343430.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=996971 AAH687_RS16640 WP_007498648.1 3248574..3249155(-) (rok) [Bacillus altitudinis strain TN5S8]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=996971 AAH687_RS16640 WP_007498648.1 3248574..3249155(-) (rok) [Bacillus altitudinis strain TN5S8]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment