Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   AAH687_RS02430 Genome accession   NZ_CP155530
Coordinates   518178..518606 (+) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain TN5S8     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 513178..523606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS02420 (AAH687_02420) - 513765..515750 (-) 1986 WP_035390499.1 hydantoinase B/oxoprolinase family protein -
  AAH687_RS02425 (AAH687_02425) - 515740..517809 (-) 2070 WP_046342601.1 hydantoinase/oxoprolinase family protein -
  AAH687_RS02430 (AAH687_02430) nucA/comI 518178..518606 (+) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AAH687_RS02435 (AAH687_02435) - 518733..520430 (+) 1698 WP_035390503.1 methyl-accepting chemotaxis protein -
  AAH687_RS02440 (AAH687_02440) comJ 520568..520954 (+) 387 WP_017366590.1 competence protein ComJ -
  AAH687_RS02445 (AAH687_02445) - 520956..521762 (-) 807 WP_025206721.1 AAC(3) family N-acetyltransferase -
  AAH687_RS02450 (AAH687_02450) - 521787..522206 (-) 420 WP_008347846.1 Lrp/AsnC family transcriptional regulator -
  AAH687_RS02455 (AAH687_02455) - 522322..523086 (+) 765 WP_008347848.1 MBL fold metallo-hydrolase -
  AAH687_RS02460 (AAH687_02460) - 523133..523462 (-) 330 WP_008347851.1 YckD family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=996930 AAH687_RS02430 WP_007498233.1 518178..518606(+) (nucA/comI) [Bacillus altitudinis strain TN5S8]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=996930 AAH687_RS02430 WP_007498233.1 518178..518606(+) (nucA/comI) [Bacillus altitudinis strain TN5S8]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment