Detailed information NTG0996914

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EL053_RS25955
• Genome accession: NZ_LR134079
• Coordinates: 5215525..5216550 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NCTC9112
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5210525..5221550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL053_RS25935 (NCTC9112_05161)	metJ	5211586..5211903 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EL053_RS25940 (NCTC9112_05162)	yiiX	5212087..5212695 (+)	609	WP_000877400.1	YiiX family permuted papain-like enzyme	-
EL053_RS25945 (NCTC9112_05163)	rpmE	5212756..5212968 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EL053_RS25950 (NCTC9112_05164)	priA	5213171..5215369 (+)	2199	WP_023155166.1	primosomal protein N'	Machinery gene
EL053_RS25955 (NCTC9112_05165)	cytR	5215525..5216550 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EL053_RS25960 (NCTC9112_05166)	ftsN	5216642..5217601 (+)	960	WP_000068837.1	cell division protein FtsN	-
EL053_RS25965 (NCTC9112_05167)	hslV	5217694..5218224 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EL053_RS25970 (NCTC9112_05168)	hslU	5218234..5219565 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EL053_RS25975 (NCTC9112_05169)	menA	5219632..5220558 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EL053_RS25980 (NCTC9112_05170)	rraA	5220651..5221136 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=996914 EL053_RS25955 WP_000644904.1 5215525..5216550(+) (cytR) [Escherichia coli strain NCTC9112]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=996914 EL053_RS25955 WP_000644904.1 5215525..5216550(+) (cytR) [Escherichia coli strain NCTC9112]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628