Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABDZ19_RS01610 | Genome accession | NZ_CP155476 |
| Coordinates | 342886..343359 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain 2024CK-00247 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 337886..348359
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDZ19_RS01585 (ABDZ19_01585) | - | 338349..340454 (-) | 2106 | WP_001117590.1 | HD domain-containing protein | - |
| ABDZ19_RS01590 (ABDZ19_01590) | - | 340494..340624 (-) | 131 | Protein_304 | hypothetical protein | - |
| ABDZ19_RS01595 (ABDZ19_01595) | rpoZ | 340663..340941 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABDZ19_RS01600 (ABDZ19_01600) | gmk | 341014..341643 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABDZ19_RS01605 (ABDZ19_01605) | ispH | 341766..342716 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABDZ19_RS01610 (ABDZ19_01610) | fimU | 342886..343359 (+) | 474 | WP_001214065.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABDZ19_RS01615 (ABDZ19_01615) | pilV | 343353..343913 (+) | 561 | WP_086221688.1 | type IV pilus modification protein PilV | Machinery gene |
| ABDZ19_RS01620 (ABDZ19_01620) | pilW | 343914..344915 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| ABDZ19_RS01625 (ABDZ19_01625) | pilX | 344912..345730 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=996835 ABDZ19_RS01610 WP_001214065.1 342886..343359(+) (fimU) [Acinetobacter baumannii strain 2024CK-00247]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=996835 ABDZ19_RS01610 WP_001214065.1 342886..343359(+) (fimU) [Acinetobacter baumannii strain 2024CK-00247]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |