Detailed information NTG0996713

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ELZ47_RS07635
• Genome accession: NZ_LR134002
• Coordinates: 1543973..1545085 (-)
• Length: 370 a.a.
• NCBI ID: WP_002895944.1
• Uniprot ID: A0ABM5NJD0
• Organism: Streptococcus sanguinis strain NCTC 10904
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1538973..1550085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ47_RS12100	-	1539824..1541236 (-)	1413	Protein_1435	sialoglycan-binding domain-containing protein	-
ELZ47_RS12105	-	1541199..1541459 (+)	261	WP_032910452.1	hypothetical protein	-
ELZ47_RS12110	-	1541486..1541725 (-)	240	Protein_1437	accessory Sec-dependent serine-rich glycoprotein adhesin	-
ELZ47_RS07620 (NCTC10904_01498)	-	1542063..1542908 (-)	846	WP_002900691.1	DUF695 domain-containing protein	-
ELZ47_RS07630 (NCTC10904_01500)	-	1543505..1543843 (-)	339	WP_002895943.1	metal-sulfur cluster assembly factor	-
ELZ47_RS07635 (NCTC10904_01501)	rpoS	1543973..1545085 (-)	1113	WP_002895944.1	RNA polymerase sigma factor RpoD	Regulator
ELZ47_RS07640 (NCTC10904_01502)	dnaG	1545088..1546872 (-)	1785	WP_331852789.1	DNA primase	-
ELZ47_RS07645 (NCTC10904_01503)	mscL	1547027..1547410 (+)	384	WP_002895947.1	large conductance mechanosensitive channel protein MscL	-
ELZ47_RS07650 (NCTC10904_01504)	rpsU	1547524..1547700 (-)	177	WP_000048054.1	30S ribosomal protein S21	-
ELZ47_RS07655 (NCTC10904_01505)	-	1547848..1548531 (-)	684	WP_126435714.1	DUF4956 domain-containing protein	-
ELZ47_RS07660 (NCTC10904_01506)	-	1548543..1549274 (-)	732	WP_126435715.1	polyphosphate polymerase domain-containing protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42318.94 Da
• Isoelectric Point: 4.4233

>NTDB_id=996713 ELZ47_RS07635 WP_002895944.1 1543973..1545085(-) (rpoS) [Streptococcus sanguinis strain NCTC 10904]
MATKQKEVTTLDVQIAEFIRNHKQTGVATDDEINDQLVIPFTLDADGIEDLLQRIQDAGISITDKEGNPSARVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLSNEEEQELAILVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=996713 ELZ47_RS07635 WP_002895944.1 1543973..1545085(-) (rpoS) [Streptococcus sanguinis strain NCTC 10904]
ATGGCTACAAAACAAAAAGAAGTAACAACATTAGACGTTCAAATTGCAGAATTTATCCGCAACCACAAGCAGACTGGAGT
TGCGACAGATGATGAAATCAATGATCAGTTGGTTATTCCTTTCACTTTGGATGCTGATGGGATTGAGGATTTGCTACAGC
GCATCCAGGATGCGGGCATCTCAATTACAGATAAGGAAGGAAATCCTAGCGCGCGCGTTTTGAATACTGAAGAGGAAGAA
GCGGAGCTGACGGATGAAGAGCTCTTAGGCAGTAATTCAGCCAAGGTCAATGACCCAGTCCGCATGTATCTGAAAGAAAT
TGGGGTTGTGCCTCTTCTCAGCAATGAAGAAGAGCAGGAGCTGGCTATCTTGGTAGAACAGGGAGACTTGGAAGCCAAGC
AGCGTCTGGCTGAGGCCAATCTTCGTCTGGTTGTTTCCATTGCCAAGCGTTATGTCGGTCGTGGTATGCAATTCCTTGAC
TTGATTCAAGAAGGAAATATGGGGCTGATGAAGGCTGTTGATAAGTTTGACTACACCAAAGGATTTAAGTTTTCAACTTA
TGCGACTTGGTGGATTCGTCAGGCCATTACCCGTGCGATTGCTGACCAAGCTCGGACCATTCGGATTCCAGTCCACATGG
TGGAAACCATTAACAAGCTGGTTCGCGAGCAACGCAATCTCTTGCAGGAATTGGGTCAAGACCCAACACCAGAGCAAATC
GCTGAGCGCATGGATATGACACCTGACAAGGTTCGTGAGATTCTCAAGATTGCTCAGGAGCCAGTTTCATTGGAAACACC
TATTGGTGAGGAAGATGACAGTCATCTGGGAGACTTTATCGAAGACGAAGTGATTGAAAATCCAGTTGACTATACAACTC
GTGTCGTCCTTCGTGAGCAGCTGGATGAAGTTTTAGACACCCTTACAGACCGCGAGGAAAACGTCTTGCGTCTGCGCTTT
GGTCTGGACGATGGAAAAATGCGGACACTGGAAGATGTCGGCAAGGTCTTCAATGTCACTCGCGAGCGGATTCGCCAGAT
TGAAGCCAAAGCCCTGCGTAAACTCCGCCACCCAAGCCGCAGCAAACCACTCAGAGACTTTATTGAAGATTAA

Domains

Predicted by InterProScan.

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.575	78.919	0.368