Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ELZ47_RS05540 Genome accession   NZ_LR134002
Coordinates   1073086..1073550 (+) Length   154 a.a.
NCBI ID   WP_126435525.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1068086..1078550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS05515 (NCTC10904_01086) pyrE 1068703..1069332 (+) 630 WP_125331013.1 orotate phosphoribosyltransferase -
  ELZ47_RS05520 (NCTC10904_01087) - 1069444..1070982 (+) 1539 WP_125331014.1 glycosyltransferase family 39 protein -
  ELZ47_RS05525 (NCTC10904_01088) - 1070979..1071731 (+) 753 WP_126435524.1 DUF4336 domain-containing protein -
  ELZ47_RS05530 (NCTC10904_01089) - 1071781..1072413 (+) 633 WP_125331016.1 hypothetical protein -
  ELZ47_RS05535 (NCTC10904_01090) - 1072424..1073077 (+) 654 WP_125331017.1 uracil-DNA glycosylase -
  ELZ47_RS05540 (NCTC10904_01091) mutX 1073086..1073550 (+) 465 WP_126435525.1 NUDIX hydrolase Machinery gene
  ELZ47_RS05545 (NCTC10904_01092) - 1073563..1074831 (+) 1269 WP_125331104.1 dihydroorotase -
  ELZ47_RS05550 (NCTC10904_01093) nt5e 1074994..1077141 (+) 2148 WP_126435526.1 cell surface ecto-5'-nucleotidase Nt5e -
  ELZ47_RS05555 (NCTC10904_01094) plsY 1077181..1077831 (-) 651 WP_126435527.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17859.27 Da        Isoelectric Point: 4.3159

>NTDB_id=996700 ELZ47_RS05540 WP_126435525.1 1073086..1073550(+) (mutX) [Streptococcus sanguinis strain NCTC 10904]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGELIECNEGTLEWVPYDQILSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=996700 ELZ47_RS05540 WP_126435525.1 1073086..1073550(+) (mutX) [Streptococcus sanguinis strain NCTC 10904]
ATGGTTCAGTTAGCAACGATTTGTTATATCGATAATGGCCGGGAGTTTCTCATGCTGCACCGCAACAAAAAGCCCAATGA
TGTTCATGCTGGGAAGTGGATTGGTGTCGGTGGCAAGCTAGAGCGAGGAGAAACCCCGCAGGAATGCGCTGCACGCGAGA
TTCTAGAGGAAACAGGACTAAAGGCTAAACCTGTTCTCAAAGGCGTTATTACTTTTCCAGAGTTTACTCCCGACTTGGAC
TGGTACACCTATGTTTTTAAGGTGACTGAGTTCGAGGGTGAACTGATTGAATGCAACGAAGGGACTTTGGAATGGGTGCC
CTATGACCAGATTTTATCTAAACCAACCTGGGAAGGCGATCATACTTTTGTTGAGTGGCTTTTAGAAGACAAGCCTTTCT
TTTCTGCAAAGTTTGTTTATGACGGAGATAAGCTATTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

93.506

100

0.935