Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY04_RS20110 Genome accession   NZ_CP155468
Coordinates   4171319..4172272 (-) Length   317 a.a.
NCBI ID   WP_126293371.1    Uniprot ID   A0A431UV90
Organism   Lysinibacillus telephonicus strain FSL R5-0572     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4166319..4177272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY04_RS20085 (MKY04_20085) - 4167237..4167854 (-) 618 WP_346235031.1 phosphatase PAP2 family protein -
  MKY04_RS20090 (MKY04_20090) - 4167950..4168264 (-) 315 WP_346235032.1 antibiotic biosynthesis monooxygenase -
  MKY04_RS20095 (MKY04_20095) - 4168292..4169284 (-) 993 WP_346235033.1 siderophore ABC transporter substrate-binding protein -
  MKY04_RS20100 (MKY04_20100) - 4169612..4170379 (-) 768 WP_126293367.1 ABC transporter ATP-binding protein -
  MKY04_RS20105 (MKY04_20105) - 4170376..4171329 (-) 954 WP_126293369.1 iron chelate uptake ABC transporter family permease subunit -
  MKY04_RS20110 (MKY04_20110) ceuB 4171319..4172272 (-) 954 WP_126293371.1 ABC transporter permease Machinery gene
  MKY04_RS20115 (MKY04_20115) - 4172706..4173578 (-) 873 WP_346235034.1 DUF6612 family protein -
  MKY04_RS20120 (MKY04_20120) - 4173760..4175247 (-) 1488 WP_126293375.1 peptide MFS transporter -
  MKY04_RS20125 (MKY04_20125) hflX 4175526..4176812 (-) 1287 WP_185807647.1 GTPase HflX -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34622.76 Da        Isoelectric Point: 8.2128

>NTDB_id=996689 MKY04_RS20110 WP_126293371.1 4171319..4172272(-) (ceuB) [Lysinibacillus telephonicus strain FSL R5-0572]
MRLWILVLAAIVLSSISLFLGATDITPMDLLDFGSDEAEIFYISRIPRLASIILAGIGMSVAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILICMLLFTSASYTQQIIFCFAFALIGTLVFMQILNRIKFKDAIFIPLIGIMYGNILSAITVFFAYEADLL
QNIDAWLIGDFSLIIKGRYELLYLSIPVLIIAYIYANRFTVAGMGEDFAKNLGVHYKFVLNLGLVLVALISTTVVLTVGI
IPFLGLIVPNLVSIFKGDNLAKTLPHTALLGVVFLLACDIVGRIIIYPYEIPISLTVGVIGSAIFLIMLFRGRAYAK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=996689 MKY04_RS20110 WP_126293371.1 4171319..4172272(-) (ceuB) [Lysinibacillus telephonicus strain FSL R5-0572]
ATGAGACTTTGGATTTTAGTACTAGCCGCAATTGTATTATCGAGTATATCGTTATTTCTTGGTGCTACAGACATTACACC
AATGGATTTACTAGATTTCGGTTCTGATGAAGCAGAAATCTTCTATATTAGCCGTATTCCTCGCCTAGCTTCTATTATAT
TAGCTGGTATTGGAATGAGTGTTGCTGGTTTAATAATGCAAAGTTTAAGTAGAAATAAATTTGTATCGCCAACAACTGCA
GGTACATTAGACGCTGCTAAGCTCGGGATTCTAATTTGTATGCTTTTATTTACAAGTGCGAGCTATACACAGCAAATAAT
ATTTTGCTTCGCCTTTGCGTTAATAGGGACACTTGTATTTATGCAAATTTTAAACCGTATTAAATTTAAAGATGCAATTT
TCATTCCATTAATCGGGATTATGTACGGTAACATATTATCTGCTATCACTGTATTTTTTGCGTATGAGGCAGATTTACTT
CAAAATATCGATGCATGGTTAATTGGAGATTTCTCATTAATCATTAAAGGTCGATATGAACTTCTATATTTAAGTATTCC
AGTATTGATTATTGCGTACATATATGCGAATCGTTTTACTGTAGCGGGGATGGGAGAAGATTTTGCAAAAAATCTTGGAG
TTCATTATAAGTTTGTGCTGAACTTAGGATTAGTGCTGGTAGCCCTAATTTCTACTACAGTAGTTTTAACGGTAGGGATT
ATACCATTTTTAGGGTTAATCGTTCCTAACCTTGTATCTATATTTAAGGGAGATAATTTAGCAAAGACGCTGCCACATAC
TGCTCTATTAGGTGTTGTATTTTTATTAGCATGTGATATTGTTGGACGAATTATTATTTATCCGTATGAGATACCAATTA
GTTTAACAGTCGGTGTAATCGGCAGTGCTATCTTCTTAATCATGTTGTTTAGGGGGAGAGCATATGCGAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A431UV90

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.266

99.685

0.511

Multiple sequence alignment