Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ELZ47_RS03415 Genome accession   NZ_LR134002
Coordinates   668801..669487 (+) Length   228 a.a.
NCBI ID   WP_032906647.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 663801..674487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS03390 (NCTC10904_00669) - 664327..664536 (-) 210 WP_002894739.1 helix-turn-helix domain-containing protein -
  ELZ47_RS03395 (NCTC10904_00670) - 664549..665076 (-) 528 WP_125353263.1 DUF2975 domain-containing protein -
  ELZ47_RS03400 (NCTC10904_00671) - 665370..665930 (+) 561 WP_126435259.1 hypothetical protein -
  ELZ47_RS03405 (NCTC10904_00672) - 666082..667278 (-) 1197 WP_126435260.1 ferric reductase-like transmembrane domain-containing protein -
  ELZ47_RS03410 (NCTC10904_00673) - 667437..668651 (-) 1215 WP_126435261.1 DUF2974 domain-containing protein -
  ELZ47_RS03415 (NCTC10904_00674) braR 668801..669487 (+) 687 WP_032906647.1 response regulator transcription factor Regulator
  ELZ47_RS03420 (NCTC10904_00675) - 669471..670451 (+) 981 WP_126435262.1 sensor histidine kinase -
  ELZ47_RS03425 (NCTC10904_00676) - 670463..670843 (+) 381 WP_164549545.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  ELZ47_RS03430 (NCTC10904_00677) - 670993..671748 (+) 756 WP_126435263.1 TraX family protein -
  ELZ47_RS03435 (NCTC10904_00678) - 671918..672697 (+) 780 WP_002899832.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26275.45 Da        Isoelectric Point: 5.3362

>NTDB_id=996686 ELZ47_RS03415 WP_032906647.1 668801..669487(+) (braR) [Streptococcus sanguinis strain NCTC 10904]
MHKILLVEDDPVIRQMIKKMLEQWGFQVVAVEDFMDVLTIFVREEPHLVLMDIGLPLFNGYHWCQEIRKISTVPIMFLSS
RDQSMDIVMAINMGADDYVTKPFDNNVFLAKVQGLLRRSYEFGNDQSLLEHQGVILNLKSTDLVFDGKVVTLTKNEFQIL
RVLFEHSDGIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEHGLKNFIETKKGIGYGLINGHTG

Nucleotide


Download         Length: 687 bp        

>NTDB_id=996686 ELZ47_RS03415 WP_032906647.1 668801..669487(+) (braR) [Streptococcus sanguinis strain NCTC 10904]
ATGCACAAGATTTTACTAGTAGAAGATGATCCAGTCATCCGTCAAATGATTAAAAAAATGCTAGAACAATGGGGCTTTCA
GGTGGTAGCAGTCGAAGACTTTATGGATGTGCTGACTATCTTTGTCCGTGAGGAGCCGCATCTGGTGCTGATGGATATTG
GCCTGCCCTTATTTAACGGTTATCACTGGTGCCAGGAAATCCGCAAGATTTCAACAGTGCCCATCATGTTTTTGTCTTCC
CGCGATCAGTCTATGGACATTGTCATGGCTATCAATATGGGGGCAGATGACTATGTGACCAAACCTTTTGACAATAATGT
CTTTCTGGCTAAGGTTCAGGGCTTGCTGCGTCGTTCCTATGAGTTTGGAAACGACCAGAGTCTCCTGGAACACCAGGGTG
TCATTCTCAATCTCAAGTCGACAGATCTGGTCTTTGATGGGAAAGTGGTGACCTTGACCAAGAACGAATTTCAGATTTTG
CGGGTTCTTTTCGAGCATTCGGATGGTATCGTGGCGCGTGATGATCTGATGAAGGAACTCTGGAATAGTGACTTTTTCAT
CGATGACAATACCCTATCGGTCAATGTCGCTCGCCTGCGTAAGAAGCTTGAAGAGCACGGACTGAAGAATTTCATCGAAA
CCAAAAAAGGAATAGGATACGGTCTCATCAATGGACACACAGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

95.614

0.465