Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ELZ47_RS02770 Genome accession   NZ_LR134002
Coordinates   544023..544799 (-) Length   258 a.a.
NCBI ID   WP_126435202.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 539023..549799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS02760 (NCTC10904_00546) - 542958..543275 (-) 318 WP_002899683.1 DUF960 domain-containing protein -
  ELZ47_RS02765 (NCTC10904_00547) - 543403..543936 (-) 534 WP_002896978.1 DUF402 domain-containing protein -
  ELZ47_RS02770 (NCTC10904_00548) recX 544023..544799 (-) 777 WP_126435202.1 recombination regulator RecX Regulator
  ELZ47_RS02775 (NCTC10904_00549) - 544826..545602 (-) 777 WP_126435204.1 aminoglycoside 3'-phosphotransferase -
  ELZ47_RS02780 (NCTC10904_00550) rlmD 545658..547028 (+) 1371 WP_126435206.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ELZ47_RS02785 (NCTC10904_00551) - 547229..547933 (-) 705 WP_049547876.1 MIP/aquaporin family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30310.70 Da        Isoelectric Point: 9.3919

>NTDB_id=996682 ELZ47_RS02770 WP_126435202.1 544023..544799(-) (recX) [Streptococcus sanguinis strain NCTC 10904]
MKITKIEKKKRLYLLELDDSEKLYITEDTIVRFMLSKGMEITEQELKEIQGYAQFSYGKNLALYHLSFKQRTAKEVKDYL
TQHDIQPEIISQVLDNLKKDNWINDRKYANSFIQSNLITGDKGAFVLKQKLSQKGISSTIIEEELSQFDFTELTDKVAEK
LLKKHQGKLPSKALQDKILQSLINKGFSYSQAKTAYQHLEIEEDKENQQELLYKELDKKYRKYSKKYDGYDLKQRLTQAL
ARKGYDFSDIASALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=996682 ELZ47_RS02770 WP_126435202.1 544023..544799(-) (recX) [Streptococcus sanguinis strain NCTC 10904]
ATGAAAATCACAAAAATCGAAAAGAAAAAAAGACTCTACCTCTTGGAGTTGGACGACAGTGAAAAGCTCTATATTACAGA
AGACACCATTGTTCGCTTCATGTTGTCTAAAGGAATGGAAATCACGGAGCAGGAGCTAAAAGAAATTCAAGGCTATGCCC
AATTTTCCTACGGAAAAAATCTAGCCCTCTACCATCTTTCCTTCAAGCAAAGAACTGCCAAGGAAGTTAAAGACTACTTA
ACACAGCACGACATCCAACCAGAAATCATCAGCCAGGTCTTGGACAATCTAAAAAAGGATAATTGGATTAATGATAGAAA
ATATGCTAACTCTTTTATCCAATCCAATCTTATCACTGGTGACAAAGGCGCTTTTGTTCTAAAACAAAAACTCAGCCAAA
AAGGGATTTCTAGCACCATCATAGAAGAAGAATTGAGCCAGTTTGATTTTACTGAACTAACAGACAAGGTTGCCGAAAAG
CTGCTCAAAAAACATCAGGGAAAACTGCCCAGCAAGGCCTTACAAGATAAAATACTTCAATCCTTGATAAACAAAGGTTT
TTCCTATAGTCAAGCTAAAACCGCCTATCAGCATTTGGAAATCGAAGAAGACAAAGAAAACCAGCAAGAGCTACTCTATA
AAGAGCTAGACAAGAAATACCGCAAGTACTCAAAAAAGTACGACGGCTACGACCTAAAACAGCGTTTAACCCAAGCTCTA
GCCCGCAAGGGCTATGATTTCTCCGACATCGCTAGCGCCCTGAGAGAATATCTTTAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364