Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   ELZ47_RS01470 Genome accession   NZ_LR134002
Coordinates   282748..284724 (+) Length   658 a.a.
NCBI ID   WP_126435039.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 277748..289724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS01455 (NCTC10904_00287) - 279818..280822 (+) 1005 WP_125331584.1 serine hydrolase domain-containing protein -
  ELZ47_RS01460 (NCTC10904_00288) - 280853..281731 (+) 879 WP_126435038.1 CPBP family intramembrane glutamic endopeptidase -
  ELZ47_RS01465 (NCTC10904_00289) - 281940..282197 (+) 258 WP_002893837.1 hypothetical protein -
  ELZ47_RS01470 (NCTC10904_00290) recP/tkt 282748..284724 (+) 1977 WP_126435039.1 transketolase Machinery gene
  ELZ47_RS01475 (NCTC10904_00291) yajC 284902..285237 (+) 336 WP_126435040.1 preprotein translocase subunit YajC -
  ELZ47_RS01480 (NCTC10904_00292) - 285469..286218 (+) 750 WP_126435041.1 isoprenyl transferase -
  ELZ47_RS01485 (NCTC10904_00293) - 286237..287040 (+) 804 WP_126435042.1 phosphatidate cytidylyltransferase -
  ELZ47_RS01495 (NCTC10904_00294) eeP 287267..288523 (+) 1257 WP_126435043.1 RIP metalloprotease RseP Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 71022.89 Da        Isoelectric Point: 4.8739

>NTDB_id=996663 ELZ47_RS01470 WP_126435039.1 282748..284724(+) (recP/tkt) [Streptococcus sanguinis strain NCTC 10904]
MSQLSVNAIRFLGIDAIEKSKSGHPGVVMGAAPMAYDLFTKQLRINPEEPNWINRDRFVLSAGHGSMLLYALLHLSGFKD
VSMDEIKNFRQWGSKTPGHPEFGHTAGVDATTGPLGQGISTATGFAQAERFLAAKYNREGYPIFDHYTYVICGDGDLMEG
VSAEAASYAGLQKLDKLVVLYDSNDINLDGETKDSFTEDVRARYKAYGWHTALVEDGTDLAAIDAAINEAKASGKPSLIE
VKTVIGYGSPNKQGTNAVHGAPLGAEEAEATRKALGWDYAPFEIPEEVYADYRQNVAERGAAAYDAWKQLVEDYKQAHPE
LAAEVTAIIAGQDPVEIKPEDFPVLENGFSQATRNSSQDALNAAAKVLPTFLGGSADLAHSNMTYIKEDGLQDDAHRLNR
NIQFGVREFAMGTILNGMALHGGLRVYGGTFFVFSDYVKAAVRLSALQGLPVTYVFTHDSIAVGEDGPTHEPIEHLAGLR
AIPNLTVFRPADARETQAAWYLALKSQSTPTALVLTRQNLTVEEGTNFDKVAKGAYVVYETGADFDTILLASGSEVNLAV
AAAKALAAEGAKIRVVSVPSTELFDAQDAAYKEEILPNAVRRRVAIEMAASQPWYKYVGLDGAVIGIDQFGASAPAGKVL
EEYGFTVEHVAKVVKNLK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=996663 ELZ47_RS01470 WP_126435039.1 282748..284724(+) (recP/tkt) [Streptococcus sanguinis strain NCTC 10904]
ATGTCACAATTATCAGTTAATGCCATTCGCTTTTTAGGGATTGACGCGATTGAAAAGTCTAAGTCAGGTCACCCTGGTGT
AGTCATGGGCGCTGCGCCGATGGCTTACGACTTGTTTACTAAACAACTTCGTATCAATCCAGAAGAGCCAAACTGGATTA
ACCGCGATCGCTTCGTCCTATCTGCAGGACATGGCTCTATGCTGCTTTATGCCCTGCTTCATCTGTCTGGCTTTAAAGAT
GTCAGCATGGACGAAATCAAAAACTTCCGCCAATGGGGCTCTAAGACACCAGGTCACCCAGAGTTTGGGCACACAGCTGG
TGTGGATGCCACTACTGGCCCACTGGGACAGGGTATTTCTACAGCTACTGGATTTGCTCAGGCAGAGCGTTTCTTGGCTG
CTAAGTATAACCGTGAAGGCTACCCAATTTTCGACCATTACACTTATGTCATCTGTGGTGATGGTGATTTGATGGAGGGT
GTTTCAGCTGAAGCTGCTTCTTATGCTGGCCTGCAAAAGCTGGACAAGTTGGTTGTTCTCTATGATTCAAATGATATCAA
CCTAGATGGAGAGACTAAGGATTCCTTTACAGAAGATGTTCGTGCCCGCTATAAAGCCTACGGTTGGCATACTGCCTTGG
TGGAAGACGGAACAGACCTTGCAGCGATTGATGCAGCCATCAATGAAGCTAAGGCTTCCGGCAAACCATCTTTGATTGAA
GTTAAGACCGTTATCGGTTACGGTTCTCCAAACAAGCAAGGAACTAATGCAGTTCACGGTGCGCCTCTTGGAGCAGAAGA
AGCAGAAGCTACTCGTAAAGCCTTGGGCTGGGACTATGCGCCATTTGAGATTCCTGAGGAAGTCTATGCTGACTACCGTC
AAAATGTGGCGGAGCGTGGTGCAGCAGCTTACGATGCTTGGAAACAGCTAGTAGAGGACTACAAGCAAGCCCATCCAGAA
TTGGCGGCAGAAGTAACAGCTATCATCGCTGGTCAAGATCCAGTAGAAATCAAACCAGAAGATTTCCCAGTACTTGAAAA
TGGCTTCTCTCAAGCGACTCGTAATTCTAGTCAGGATGCCCTCAATGCAGCAGCTAAGGTGCTTCCGACTTTCCTCGGCG
GTTCTGCTGACTTGGCTCACTCCAATATGACCTACATCAAGGAAGACGGCTTGCAGGATGATGCCCACCGTCTCAACCGC
AATATCCAATTTGGTGTGCGCGAGTTTGCTATGGGAACAATTCTAAACGGTATGGCACTTCATGGTGGTCTTCGCGTTTA
CGGTGGTACCTTCTTCGTCTTCTCAGACTATGTCAAGGCAGCTGTCCGTTTGTCTGCCCTTCAAGGTTTGCCAGTGACTT
ATGTCTTCACACACGATTCTATTGCAGTTGGTGAAGATGGCCCAACTCATGAGCCGATTGAGCACTTGGCTGGTCTGCGT
GCCATTCCAAACCTGACTGTTTTCCGCCCAGCAGATGCGCGTGAAACTCAGGCAGCTTGGTACTTGGCCCTTAAGAGCCA
ATCCACTCCGACTGCTCTGGTCTTGACCCGTCAAAATCTAACAGTTGAAGAAGGAACAAACTTTGACAAGGTAGCTAAAG
GTGCTTATGTGGTCTACGAAACAGGAGCAGATTTCGATACCATCTTGCTGGCTTCTGGTTCTGAGGTTAATTTGGCTGTT
GCAGCTGCTAAAGCACTTGCAGCAGAAGGTGCTAAAATCCGCGTGGTTAGCGTGCCATCAACAGAGCTTTTTGATGCTCA
AGATGCAGCCTACAAAGAAGAAATTCTGCCAAATGCAGTTCGTCGCCGTGTAGCGATTGAGATGGCAGCTAGCCAGCCTT
GGTACAAGTATGTCGGTCTGGACGGTGCAGTTATCGGAATCGACCAGTTTGGTGCATCTGCTCCAGCAGGTAAGGTGCTG
GAAGAATACGGCTTTACAGTTGAACACGTAGCAAAAGTTGTTAAAAATCTTAAATAA

Domains

Predicted by InterProScan.

Transketolase, pyrimidine binding domain (Transket_pyr)

(352-521)

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(3-334)

Transketolase, C-terminal domain (Transketolase_C)

(545-650)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

80.518

99.848

0.804