Detailed information NTG0996652

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: ELZ47_RS00285
• Genome accession: NZ_LR134002
• Coordinates: 43197..45146 (-)
• Length: 649 a.a.
• NCBI ID: WP_125332466.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain NCTC 10904
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 38197..50146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ47_RS00265 (NCTC10904_00052)	purM	39141..40163 (+)	1023	WP_125332473.1	phosphoribosylformylglycinamidine cyclo-ligase	-
ELZ47_RS00270 (NCTC10904_00053)	purN	40160..40711 (+)	552	WP_125332471.1	phosphoribosylglycinamide formyltransferase	-
ELZ47_RS00275 (NCTC10904_00054)	-	40766..41473 (+)	708	WP_061603008.1	suppressor of fused domain protein	-
ELZ47_RS00280 (NCTC10904_00055)	purH	41513..43060 (+)	1548	WP_125332468.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
ELZ47_RS00285 (NCTC10904_00056)	lytF	43197..45146 (-)	1950	WP_125332466.1	murein hydrolase LytF	Regulator
ELZ47_RS00290 (NCTC10904_00057)	purD	45471..46736 (+)	1266	WP_126434934.1	phosphoribosylamine--glycine ligase	-
ELZ47_RS00295 (NCTC10904_00058)	purE	46927..47415 (+)	489	WP_002894355.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
ELZ47_RS00300 (NCTC10904_00059)	purK	47402..48481 (+)	1080	WP_126434935.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
ELZ47_RS00305 (NCTC10904_00060)	-	48629..49264 (+)	636	WP_126434936.1	YdcF family protein	-
ELZ47_RS00310 (NCTC10904_00061)	-	49279..49506 (+)	228	WP_126434937.1	phosphoribosylaminoimidazole carboxylase	-

Sequence

Protein

• Length: 649 a.a.
• Molecular weight: 72262.71 Da
• Isoelectric Point: 6.8801

>NTDB_id=996652 ELZ47_RS00285 WP_125332466.1 43197..45146(-) (lytF) [Streptococcus sanguinis strain NCTC 10904]
MKKYQKLFLLSGAVLGLFASHSKVHATETPESEVKILGPTDRASNVDVTVNDRTASISYTRSQAQEPYLIAHAVWSEENG
QDDLKWYDTPQTPITDIDLSNHPGYGTFHVHTYIRIGERLVALNATTFHVDKPASKTNASVSGDTGRISFSRNKDQTHSK
IVHAVWSDEKGSDDLQWYDAGEESTEFNLSKHRGYGRYFVDTYENVNGKMIFLSGTTFHLENPKPIIETSFPQTGIMEIN
VKNVPDTMHRIVLPTWSDKKGQDDLQWYEASKNPDGSYSARVELRKHNYDTGTYNIHLYGQSYVQPESTGITGTTVQVDS
GKLPSDEEQKPLFTVENINPKQGTYTVKTTETSLSKPIQSVRVPIWSTSNQSNLKWYAATPNGDGSFSATFDIRNHQALS
GTYNNHVYVTYKDGSERSYAADAVSMSTDQIQAKVAVRKTEANRYEVTVTDAYGDGDIILPTWSEVNGQDDIKWYTANKV
GNGTYKFTVDTQNHKGSGLFNTHVYRRKAGQLIGLTGTSYQVEKSSVQSANIQPNYAAANATTYPVGQCTWGAKALAPWA
GNYWGNGGQWAASARRAGFHTGSRPEVGAIACWDDGGYGHVGVVTHVESNTRIQIQESNYLGKQYISNFRGWFDPTASYW
GRLTYIYPK

Nucleotide

• Length: 1950 bp

>NTDB_id=996652 ELZ47_RS00285 WP_125332466.1 43197..45146(-) (lytF) [Streptococcus sanguinis strain NCTC 10904]
ATGAAGAAATATCAAAAACTGTTTTTATTATCCGGAGCTGTCCTAGGTCTCTTTGCGAGCCACTCAAAAGTTCATGCGAC
CGAAACGCCTGAATCTGAAGTCAAAATTCTAGGCCCTACTGATCGTGCCAGCAATGTCGATGTGACTGTGAACGATCGTA
CAGCCTCTATTAGTTATACCCGTTCTCAAGCTCAAGAACCTTATCTTATTGCTCATGCTGTTTGGTCTGAAGAAAACGGA
CAAGATGATTTGAAATGGTATGATACACCACAAACACCCATCACTGACATTGACTTAAGCAACCATCCAGGATATGGTAC
GTTTCATGTTCATACTTACATACGGATAGGAGAGCGCTTGGTAGCTCTAAATGCCACTACCTTTCATGTAGATAAACCAG
CTAGTAAAACGAATGCATCCGTCTCAGGAGATACAGGACGCATTAGTTTTTCCCGCAACAAAGACCAAACTCACTCAAAG
ATTGTCCATGCTGTCTGGTCAGATGAAAAAGGCAGCGACGACCTTCAGTGGTATGACGCAGGAGAAGAATCAACTGAGTT
TAATCTATCCAAACATCGTGGTTATGGACGATACTTCGTTGACACTTACGAAAATGTAAACGGAAAAATGATTTTCCTAT
CTGGTACTACGTTCCATCTTGAAAATCCGAAACCGATAATCGAAACTAGCTTCCCTCAGACCGGCATCATGGAAATAAAT
GTCAAAAACGTACCTGACACCATGCATCGAATTGTTCTTCCTACTTGGTCTGATAAGAAAGGGCAAGATGATCTACAATG
GTACGAAGCAAGCAAAAATCCAGATGGCAGCTACAGCGCTCGGGTGGAACTCAGAAAGCATAACTACGACACTGGGACTT
ACAATATCCATCTTTACGGCCAAAGCTATGTTCAACCGGAATCAACTGGTATAACAGGAACGACAGTTCAAGTTGACAGC
GGAAAATTACCTTCAGACGAGGAACAGAAACCTCTTTTTACGGTGGAAAATATCAACCCCAAACAAGGGACCTACACCGT
GAAAACTACCGAAACTAGCTTATCTAAACCTATTCAATCTGTCCGGGTGCCAATTTGGAGCACTAGCAATCAGAGCAATC
TTAAATGGTATGCAGCCACTCCTAACGGAGATGGCTCCTTCAGCGCAACCTTTGATATCCGTAATCATCAGGCTTTGTCT
GGAACCTATAACAACCATGTGTATGTCACCTATAAGGACGGCAGTGAGCGTAGCTACGCAGCAGATGCCGTCTCAATGTC
TACCGACCAAATTCAAGCCAAGGTTGCAGTCAGGAAAACTGAGGCTAATCGCTATGAGGTGACCGTGACAGACGCCTACG
GAGATGGCGATATTATTCTGCCAACTTGGTCAGAAGTCAATGGGCAAGATGATATCAAATGGTATACTGCAAATAAGGTC
GGCAATGGAACTTACAAATTTACCGTGGATACTCAGAATCACAAGGGGAGCGGTCTATTTAACACCCATGTCTATCGTAG
AAAAGCGGGACAGTTAATCGGCCTGACTGGAACTAGCTATCAGGTTGAGAAATCAAGCGTTCAATCAGCTAATATTCAGC
CTAACTATGCCGCTGCTAATGCGACAACTTATCCTGTCGGCCAATGCACTTGGGGAGCTAAAGCTCTAGCTCCTTGGGCA
GGAAATTACTGGGGCAACGGCGGTCAATGGGCGGCTAGTGCTAGAAGAGCTGGATTCCATACCGGCAGTAGGCCTGAGGT
TGGCGCCATCGCCTGCTGGGATGACGGCGGCTACGGCCACGTCGGTGTCGTGACTCATGTCGAATCCAATACCCGCATCC
AGATCCAAGAGTCTAACTACCTCGGCAAGCAGTACATCAGCAACTTCCGTGGCTGGTTCGACCCAACTGCTTCTTACTGG
GGCCGCCTGACCTATATCTACCCTAAATAA

Domains

Predicted by InterProScan.

• GBS Bsp-like repeat (GBS_Bsp-like) (233-307)

• GBS Bsp-like repeat (GBS_Bsp-like) (335-418)

• GBS Bsp-like repeat (GBS_Bsp-like) (70-116)

• GBS Bsp-like repeat (GBS_Bsp-like) (155-218)

• GBS Bsp-like repeat (GBS_Bsp-like) (438-514)

• CHAP domain (CHAP) (542-619)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii strain NCTC7865	44.571	80.894	0.361