Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSS91_RS12005 | Genome accession | NZ_CP155466 |
| Coordinates | 2442490..2443575 (+) | Length | 361 a.a. |
| NCBI ID | WP_034771006.1 | Uniprot ID | A0A090IWD5 |
| Organism | Caldifermentibacillus hisashii strain FSL W8-0983 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2437490..2448575
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS91_RS11980 (NSS91_11980) | - | 2437949..2439643 (+) | 1695 | WP_041846288.1 | SNF2-related protein | - |
| NSS91_RS11985 (NSS91_11985) | - | 2439612..2440415 (+) | 804 | WP_346207401.1 | YqhG family protein | - |
| NSS91_RS11990 (NSS91_11990) | - | 2440956..2441126 (-) | 171 | WP_034770998.1 | DUF2759 domain-containing protein | - |
| NSS91_RS11995 (NSS91_11995) | - | 2441197..2441439 (-) | 243 | WP_034771001.1 | DUF2626 domain-containing protein | - |
| NSS91_RS12000 (NSS91_12000) | - | 2441578..2442279 (-) | 702 | WP_034771004.1 | helix-turn-helix domain-containing protein | - |
| NSS91_RS12005 (NSS91_12005) | comGA | 2442490..2443575 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSS91_RS12010 (NSS91_12010) | comGB | 2443550..2444581 (+) | 1032 | WP_034771008.1 | competence type IV pilus assembly protein ComGB | - |
| NSS91_RS12015 (NSS91_12015) | comGC | 2444608..2444907 (+) | 300 | WP_034771010.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSS91_RS12020 (NSS91_12020) | comGD | 2444882..2445385 (+) | 504 | WP_034771013.1 | competence type IV pilus minor pilin ComGD | - |
| NSS91_RS12025 (NSS91_12025) | - | 2445360..2445716 (+) | 357 | WP_034771015.1 | hypothetical protein | - |
| NSS91_RS12030 (NSS91_12030) | comGF | 2445688..2446152 (+) | 465 | WP_034771017.1 | competence type IV pilus minor pilin ComGF | - |
| NSS91_RS12035 (NSS91_12035) | comGG | 2446100..2446573 (+) | 474 | WP_176458882.1 | competence type IV pilus minor pilin ComGG | - |
| NSS91_RS12040 (NSS91_12040) | - | 2446674..2446859 (+) | 186 | WP_034771024.1 | YqzE family protein | - |
| NSS91_RS12045 (NSS91_12045) | - | 2446890..2448014 (-) | 1125 | WP_034771027.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40615.22 Da Isoelectric Point: 7.5768
>NTDB_id=996582 NSS91_RS12005 WP_034771006.1 2442490..2443575(+) (comGA) [Caldifermentibacillus hisashii strain FSL W8-0983]
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
Nucleotide
Download Length: 1086 bp
>NTDB_id=996582 NSS91_RS12005 WP_034771006.1 2442490..2443575(+) (comGA) [Caldifermentibacillus hisashii strain FSL W8-0983]
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCTTCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTGGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
TATATTACCACAGGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCGCATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
AGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCTGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTTTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAGACAAAGTCGCTGGAAAATTGA
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCTTCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTGGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
TATATTACCACAGGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCGCATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
AGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCTGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTTTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAGACAAAGTCGCTGGAAAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.695 |
97.23 |
0.551 |