Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | ELZ66_RS06170 | Genome accession | NZ_LR133933 |
| Coordinates | 1337685..1338710 (+) | Length | 341 a.a. |
| NCBI ID | WP_015444568.1 | Uniprot ID | Q9S4T1 |
| Organism | Legionella pneumophila strain NCTC12180 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1332685..1343710
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELZ66_RS06140 (NCTC12180_01219) | - | 1333119..1333436 (+) | 318 | WP_010947009.1 | DUF2845 domain-containing protein | - |
| ELZ66_RS06145 (NCTC12180_01220) | - | 1333473..1333844 (+) | 372 | WP_010947010.1 | protease inhibitor I42 family protein | - |
| ELZ66_RS06150 (NCTC12180_01221) | - | 1333892..1335616 (-) | 1725 | WP_010947011.1 | NAD-dependent malic enzyme | - |
| ELZ66_RS06155 (NCTC12180_01222) | - | 1335696..1336079 (+) | 384 | WP_010947012.1 | hypothetical protein | - |
| ELZ66_RS06160 (NCTC12180_01223) | surE | 1336082..1336837 (+) | 756 | WP_010947013.1 | 5'/3'-nucleotidase SurE | - |
| ELZ66_RS06165 (NCTC12180_01224) | - | 1336856..1337599 (+) | 744 | WP_010947014.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| ELZ66_RS06170 (NCTC12180_01225) | rpoS | 1337685..1338710 (+) | 1026 | WP_015444568.1 | RNA polymerase sigma factor RpoS | Regulator |
| ELZ66_RS06175 (NCTC12180_01226) | hmgA | 1338813..1340063 (-) | 1251 | WP_010947016.1 | homogentisate 1,2-dioxygenase | - |
| ELZ66_RS06180 (NCTC12180_01227) | - | 1340209..1340952 (+) | 744 | WP_010947017.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| ELZ66_RS06185 (NCTC12180_01228) | ruvC | 1340952..1341476 (+) | 525 | WP_010947018.1 | crossover junction endodeoxyribonuclease RuvC | - |
| ELZ66_RS06190 (NCTC12180_01229) | ruvA | 1341473..1342072 (+) | 600 | WP_010947019.1 | Holliday junction branch migration protein RuvA | - |
| ELZ66_RS06195 (NCTC12180_01230) | - | 1342122..1342442 (+) | 321 | WP_010947020.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 39449.70 Da Isoelectric Point: 4.3732
>NTDB_id=996525 ELZ66_RS06170 WP_015444568.1 1337685..1338710(+) (rpoS) [Legionella pneumophila strain NCTC12180]
MQDDEEPIKDKEFKEEEWSEPDDESLLSEEDVEPDIEKMEEELDELPEFTDDETFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF
MQDDEEPIKDKEFKEEEWSEPDDESLLSEEDVEPDIEKMEEELDELPEFTDDETFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF
Nucleotide
Download Length: 1026 bp
>NTDB_id=996525 ELZ66_RS06170 WP_015444568.1 1337685..1338710(+) (rpoS) [Legionella pneumophila strain NCTC12180]
ATGCAAGATGATGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGAATCTCTGTT
GTCAGAAGAAGATGTTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAA
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGTTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGATTGCCTCTTCTTGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGTTTGCCTATTCATGTCGTGAAAGA
ACTTAATGTTTATCTCAGAGCGGCAAGGCAATTGACGCAAAAACTGGATCATGAACCATCACCTGAAGAAATAGCAGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGATTGAATGATAAAGTCGCTTCAGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAATGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAGGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCGTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA
ATGCAAGATGATGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGAATCTCTGTT
GTCAGAAGAAGATGTTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAA
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGTTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGATTGCCTCTTCTTGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGTTTGCCTATTCATGTCGTGAAAGA
ACTTAATGTTTATCTCAGAGCGGCAAGGCAATTGACGCAAAAACTGGATCATGAACCATCACCTGAAGAAATAGCAGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGATTGAATGATAAAGTCGCTTCAGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAATGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAGGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCGTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.509 |
81.232 |
0.548 |