Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABDE90_RS01645 | Genome accession | NZ_CP155458 |
| Coordinates | 350080..350505 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain 2024CK-00329 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 345080..355505
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDE90_RS01635 (ABDE90_01630) | pilY1 | 345734..349588 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ABDE90_RS01640 (ABDE90_01635) | pilY2 | 349601..350083 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| ABDE90_RS01645 (ABDE90_01640) | pilE | 350080..350505 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ABDE90_RS01650 (ABDE90_01645) | rpsP | 350652..350903 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABDE90_RS01655 (ABDE90_01650) | rimM | 350923..351471 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABDE90_RS01660 (ABDE90_01655) | trmD | 351517..352257 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABDE90_RS01665 (ABDE90_01660) | rplS | 352465..352833 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABDE90_RS01670 (ABDE90_01665) | - | 352885..353826 (-) | 942 | WP_085946156.1 | triacylglycerol lipase | - |
| ABDE90_RS01675 (ABDE90_01670) | - | 353941..354975 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=996461 ABDE90_RS01645 WP_000788342.1 350080..350505(+) (pilE) [Acinetobacter baumannii strain 2024CK-00329]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=996461 ABDE90_RS01645 WP_000788342.1 350080..350505(+) (pilE) [Acinetobacter baumannii strain 2024CK-00329]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |