Detailed information NTG0996460

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ABDE90_RS01640
• Genome accession: NZ_CP155458
• Coordinates: 349601..350083 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2024CK-00329
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 344601..355083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDE90_RS01630 (ABDE90_01625)	pilX	344904..345722 (+)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ABDE90_RS01635 (ABDE90_01630)	pilY1	345734..349588 (+)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
ABDE90_RS01640 (ABDE90_01635)	pilY2	349601..350083 (+)	483	WP_001046417.1	type IV pilin protein	Machinery gene
ABDE90_RS01645 (ABDE90_01640)	pilE	350080..350505 (+)	426	WP_000788342.1	type IV pilin protein	Machinery gene
ABDE90_RS01650 (ABDE90_01645)	rpsP	350652..350903 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ABDE90_RS01655 (ABDE90_01650)	rimM	350923..351471 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
ABDE90_RS01660 (ABDE90_01655)	trmD	351517..352257 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ABDE90_RS01665 (ABDE90_01660)	rplS	352465..352833 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
ABDE90_RS01670 (ABDE90_01665)	-	352885..353826 (-)	942	WP_085946156.1	triacylglycerol lipase	-
ABDE90_RS01675 (ABDE90_01670)	-	353941..354975 (-)	1035	WP_001189451.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=996460 ABDE90_RS01640 WP_001046417.1 349601..350083(+) (pilY2) [Acinetobacter baumannii strain 2024CK-00329]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=996460 ABDE90_RS01640 WP_001046417.1 349601..350083(+) (pilY2) [Acinetobacter baumannii strain 2024CK-00329]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444