Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABDE97_RS17745 | Genome accession | NZ_CP155455 |
| Coordinates | 3665963..3666388 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain 2024CK-00278 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3660963..3671388
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDE97_RS17715 (ABDE97_17695) | - | 3661492..3662526 (+) | 1035 | WP_024432274.1 | lipase secretion chaperone | - |
| ABDE97_RS17720 (ABDE97_17700) | - | 3662641..3663582 (+) | 942 | WP_086223958.1 | triacylglycerol lipase | - |
| ABDE97_RS17725 (ABDE97_17705) | rplS | 3663635..3664003 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABDE97_RS17730 (ABDE97_17710) | trmD | 3664211..3664951 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABDE97_RS17735 (ABDE97_17715) | rimM | 3664997..3665545 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABDE97_RS17740 (ABDE97_17720) | rpsP | 3665565..3665816 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABDE97_RS17745 (ABDE97_17725) | pilE | 3665963..3666388 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| ABDE97_RS17750 (ABDE97_17730) | pilY2 | 3666385..3666867 (-) | 483 | WP_001046416.1 | type IV pilin protein | Machinery gene |
| ABDE97_RS17755 (ABDE97_17735) | pilY1 | 3666880..3670734 (-) | 3855 | WP_024432273.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=996434 ABDE97_RS17745 WP_000788339.1 3665963..3666388(-) (pilE) [Acinetobacter baumannii strain 2024CK-00278]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=996434 ABDE97_RS17745 WP_000788339.1 3665963..3666388(-) (pilE) [Acinetobacter baumannii strain 2024CK-00278]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |