Detailed information NTG0996409

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FVE81_RS23660
• Genome accession: NZ_LR130564
• Coordinates: 4853379..4854404 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS14387 isolate MS14387
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4848379..4859404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FVE81_RS23640	metJ	4849564..4849881 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
FVE81_RS23645	yiiX	4849941..4850549 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
FVE81_RS23650	rpmE	4850610..4850822 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
FVE81_RS23655	priA	4851025..4853223 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
FVE81_RS23660	cytR	4853379..4854404 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
FVE81_RS23665	ftsN	4854496..4855455 (+)	960	WP_000068844.1	cell division protein FtsN	-
FVE81_RS23670	hslV	4855548..4856078 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
FVE81_RS23675	hslU	4856088..4857419 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
FVE81_RS23680	menA	4857486..4858412 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FVE81_RS23685	rraA	4858505..4858990 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=996409 FVE81_RS23660 WP_000644904.1 4853379..4854404(+) (cytR) [Escherichia coli strain MS14387 isolate MS14387]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=996409 FVE81_RS23660 WP_000644904.1 4853379..4854404(+) (cytR) [Escherichia coli strain MS14387 isolate MS14387]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628