Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QMM94_RS09415 Genome accession   NZ_AP027134
Coordinates   1937277..1938320 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain JP008     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1932277..1943320
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM94_RS09385 (JP008_17950) - 1932695..1933951 (-) 1257 WP_001793428.1 aminopeptidase -
  QMM94_RS09390 (JP008_17960) - 1933954..1934154 (-) 201 WP_000180460.1 DUF1128 family protein -
  QMM94_RS09395 (JP008_17970) - 1934301..1934765 (+) 465 WP_154284135.1 low molecular weight protein-tyrosine-phosphatase -
  QMM94_RS09400 (JP008_17980) - 1934772..1935047 (+) 276 WP_154284136.1 YtxH domain-containing protein -
  QMM94_RS09405 (JP008_17990) - 1935325..1936542 (+) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  QMM94_RS09410 (JP008_18000) vraR 1936658..1937287 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  QMM94_RS09415 (JP008_18010) vraS 1937277..1938320 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  QMM94_RS09420 (JP008_18020) liaF 1938317..1939018 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  QMM94_RS09425 (JP008_18030) - 1939033..1939419 (-) 387 WP_001110179.1 hypothetical protein -
  QMM94_RS09430 (JP008_18040) map 1939636..1940394 (-) 759 WP_000636144.1 type I methionyl aminopeptidase -
  QMM94_RS09435 (JP008_18050) - 1940861..1941847 (+) 987 WP_154284137.1 aromatic acid exporter family protein -
  QMM94_RS09440 (JP008_18060) - 1942278..1942691 (-) 414 WP_154284138.1 hypothetical protein -
  QMM94_RS09445 - 1942720..1942830 (-) 111 WP_154284139.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=99618 QMM94_RS09415 WP_001017131.1 1937277..1938320(-) (vraS) [Staphylococcus aureus strain JP008]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=99618 QMM94_RS09415 WP_001017131.1 1937277..1938320(-) (vraS) [Staphylococcus aureus strain JP008]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTTTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTACGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment