Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AAGR08_RS17030 | Genome accession | NZ_CP155066 |
| Coordinates | 3674429..3674977 (-) | Length | 182 a.a. |
| NCBI ID | WP_097095213.1 | Uniprot ID | A0A286BSN1 |
| Organism | Pantoea sp. BRR-3P | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3669429..3679977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAGR08_RS17000 (AAGR08_17000) | - | 3669546..3669941 (+) | 396 | WP_097095207.1 | transposase | - |
| AAGR08_RS17005 (AAGR08_17005) | - | 3670874..3671815 (-) | 942 | WP_345827422.1 | DMT family transporter | - |
| AAGR08_RS17010 (AAGR08_17010) | - | 3671889..3672719 (-) | 831 | WP_097095209.1 | AraC family transcriptional regulator | - |
| AAGR08_RS17015 (AAGR08_17015) | - | 3672842..3673369 (+) | 528 | WP_097095210.1 | isochorismatase family protein | - |
| AAGR08_RS17020 (AAGR08_17020) | - | 3673442..3673885 (+) | 444 | WP_345827423.1 | antitoxin Xre-like helix-turn-helix domain-containing protein | - |
| AAGR08_RS17025 (AAGR08_17025) | - | 3673882..3674343 (+) | 462 | WP_345827424.1 | RES family NAD+ phosphorylase | - |
| AAGR08_RS17030 (AAGR08_17030) | ssb | 3674429..3674977 (-) | 549 | WP_097095213.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| AAGR08_RS17035 (AAGR08_17035) | uvrA | 3675201..3678029 (+) | 2829 | WP_097095214.1 | excinuclease ABC subunit UvrA | - |
| AAGR08_RS17040 (AAGR08_17040) | - | 3678249..3679313 (+) | 1065 | WP_097095215.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| AAGR08_RS17045 (AAGR08_17045) | - | 3679320..3679670 (-) | 351 | WP_097095216.1 | MmcQ/YjbR family DNA-binding protein | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 19598.56 Da Isoelectric Point: 5.2456
>NTDB_id=996087 AAGR08_RS17030 WP_097095213.1 3674429..3674977(-) (ssb) [Pantoea sp. BRR-3P]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKTTGENKEITEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQEKYTTEVVVNVGGTMQMLGGRQQGANAGGAPAGGQGGNNNGWGQPQQPQQQPQGGNQFSGGAQQR
PQQQSAPANNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKTTGENKEITEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQEKYTTEVVVNVGGTMQMLGGRQQGANAGGAPAGGQGGNNNGWGQPQQPQQQPQGGNQFSGGAQQR
PQQQSAPANNEPPMDFDDDIPF
Nucleotide
Download Length: 549 bp
>NTDB_id=996087 AAGR08_RS17030 WP_097095213.1 3674429..3674977(-) (ssb) [Pantoea sp. BRR-3P]
ATGGCCAGTCGTGGCGTAAACAAAGTGATTCTAGTCGGGAATCTGGGTCAGGATCCGGAAGTGCGCTACATGCCAAATGG
TGGCGCGGTAGCCAACATTACGCTGGCCACGTCAGAAAGCTGGCGCGATAAGACCACCGGTGAAAACAAAGAGATCACTG
AATGGCACCGCGTGGTGCTGTTTGGCAAGCTGGCGGAAGTAGCCGGAGAATACCTGCGTAAAGGTTCTCAGGTTTACATC
GAAGGGCAGCTGCGTACCCGTAAATGGACTGACCAGAGCGGCCAGGAAAAATACACCACTGAAGTGGTGGTAAATGTTGG
CGGCACCATGCAGATGCTCGGTGGACGTCAGCAGGGCGCGAACGCCGGTGGCGCACCCGCGGGCGGCCAGGGCGGCAATA
ACAACGGTTGGGGCCAGCCACAGCAGCCACAACAGCAGCCGCAAGGCGGCAACCAGTTCAGCGGCGGTGCTCAGCAGCGT
CCACAGCAGCAGAGCGCACCGGCGAACAATGAACCGCCGATGGATTTTGACGACGACATTCCGTTCTAA
ATGGCCAGTCGTGGCGTAAACAAAGTGATTCTAGTCGGGAATCTGGGTCAGGATCCGGAAGTGCGCTACATGCCAAATGG
TGGCGCGGTAGCCAACATTACGCTGGCCACGTCAGAAAGCTGGCGCGATAAGACCACCGGTGAAAACAAAGAGATCACTG
AATGGCACCGCGTGGTGCTGTTTGGCAAGCTGGCGGAAGTAGCCGGAGAATACCTGCGTAAAGGTTCTCAGGTTTACATC
GAAGGGCAGCTGCGTACCCGTAAATGGACTGACCAGAGCGGCCAGGAAAAATACACCACTGAAGTGGTGGTAAATGTTGG
CGGCACCATGCAGATGCTCGGTGGACGTCAGCAGGGCGCGAACGCCGGTGGCGCACCCGCGGGCGGCCAGGGCGGCAATA
ACAACGGTTGGGGCCAGCCACAGCAGCCACAACAGCAGCCGCAAGGCGGCAACCAGTTCAGCGGCGGTGCTCAGCAGCGT
CCACAGCAGCAGAGCGCACCGGCGAACAATGAACCGCCGATGGATTTTGACGACGACATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
71.809 |
100 |
0.742 |
| ssb | Glaesserella parasuis strain SC1401 |
55.851 |
100 |
0.577 |
| ssb | Neisseria meningitidis MC58 |
46.196 |
100 |
0.467 |
| ssb | Neisseria gonorrhoeae MS11 |
46.196 |
100 |
0.467 |