Detailed information NTG0996078

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EW036_RS24470
• Genome accession: NZ_LR130545
• Coordinates: 4893288..4894313 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain B36 isolate B36
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4888288..4899313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EW036_RS24450	metJ	4889473..4889790 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EW036_RS24455	yiiX	4889850..4890458 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
EW036_RS24460	rpmE	4890519..4890731 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EW036_RS24465	priA	4890934..4893132 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
EW036_RS24470	cytR	4893288..4894313 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
EW036_RS24475	ftsN	4894405..4895364 (+)	960	WP_000068834.1	cell division protein FtsN	-
EW036_RS24480	hslV	4895457..4895987 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EW036_RS24485	hslU	4895997..4897328 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
EW036_RS24490	menA	4897395..4898321 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EW036_RS24495	rraA	4898414..4898899 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EW036_RS24500	zapB	4898984..4899229 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=996078 EW036_RS24470 WP_000644908.1 4893288..4894313(+) (cytR) [Escherichia coli strain B36 isolate B36]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=996078 EW036_RS24470 WP_000644908.1 4893288..4894313(+) (cytR) [Escherichia coli strain B36 isolate B36]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625