Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   ABC967_RS13070 Genome accession   NZ_CP155059
Coordinates   2638483..2639370 (-) Length   295 a.a.
NCBI ID   WP_109183214.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CC133-MSSA     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2633483..2644370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC967_RS13040 (ABC967_13040) - 2633497..2633589 (+) 93 WP_010956583.1 hypothetical protein -
  ABC967_RS13045 (ABC967_13045) - 2633697..2634194 (-) 498 WP_001065267.1 glutathione peroxidase -
  ABC967_RS13050 (ABC967_13050) - 2634204..2634464 (-) 261 WP_014532715.1 hypothetical protein -
  ABC967_RS13055 (ABC967_13055) - 2634846..2634959 (-) 114 WP_072357681.1 hypothetical protein -
  ABC967_RS13060 (ABC967_13060) - 2635623..2637623 (-) 2001 WP_000776730.1 ABC transporter permease -
  ABC967_RS13065 (ABC967_13065) - 2637620..2638375 (-) 756 WP_000923767.1 ABC transporter ATP-binding protein -
  ABC967_RS13070 (ABC967_13070) braS 2638483..2639370 (-) 888 WP_109183214.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  ABC967_RS13075 (ABC967_13075) braR 2639381..2640046 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  ABC967_RS13080 (ABC967_13080) - 2640072..2640272 (-) 201 WP_000604725.1 hypothetical protein -
  ABC967_RS13085 (ABC967_13085) - 2640470..2641894 (+) 1425 WP_000948997.1 alkaline phosphatase -
  ABC967_RS13090 (ABC967_13090) - 2641964..2642074 (+) 111 WP_001791296.1 hypothetical protein -
  ABC967_RS13095 (ABC967_13095) - 2642177..2642632 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  ABC967_RS13100 (ABC967_13100) - 2642877..2643638 (-) 762 WP_000323449.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=995943 ABC967_RS13070 WP_109183214.1 2638483..2639370(-) (braS) [Staphylococcus aureus strain CC133-MSSA]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFLKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEGDLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=995943 ABC967_RS13070 WP_109183214.1 2638483..2639370(-) (braS) [Staphylococcus aureus strain CC133-MSSA]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTTATAGGTATTAAAT
ATTTAAGTTTTTTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGGGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986


Multiple sequence alignment