Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AAHT64_RS20330 | Genome accession | NZ_CP155054 |
| Coordinates | 3936027..3936317 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain R38 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3931027..3941317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHT64_RS20315 (AAHT64_20315) | yabE | 3931223..3932536 (-) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
| AAHT64_RS20320 (AAHT64_20320) | dayD | 3932692..3933459 (-) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| AAHT64_RS20325 (AAHT64_20325) | metG | 3933538..3935532 (-) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| AAHT64_RS20330 (AAHT64_20330) | abrB | 3936027..3936317 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AAHT64_RS20335 (AAHT64_20335) | rsmI | 3936366..3937244 (-) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AAHT64_RS20340 (AAHT64_20340) | yazA | 3937219..3937518 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| AAHT64_RS20345 (AAHT64_20345) | trmNF | 3937505..3938248 (-) | 744 | WP_003226765.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AAHT64_RS20350 (AAHT64_20350) | yabA | 3938307..3938666 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AAHT64_RS20355 (AAHT64_20355) | ricT | 3938681..3939508 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| AAHT64_RS20360 (AAHT64_20360) | holB | 3939511..3940500 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| AAHT64_RS20365 (AAHT64_20365) | yaaR | 3940512..3940952 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| AAHT64_RS20370 (AAHT64_20370) | darA | 3940965..3941294 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=995892 AAHT64_RS20330 WP_003226760.1 3936027..3936317(+) (abrB) [Bacillus subtilis subsp. subtilis strain R38]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=995892 AAHT64_RS20330 WP_003226760.1 3936027..3936317(+) (abrB) [Bacillus subtilis subsp. subtilis strain R38]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |