Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AAHT64_RS15815 Genome accession   NZ_CP155054
Coordinates   3049143..3049937 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 3044143..3054937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS15780 (AAHT64_15780) ephM 3044985..3045845 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  AAHT64_RS15785 (AAHT64_15785) spdL 3045832..3046164 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  AAHT64_RS15790 (AAHT64_15790) yfhK 3046249..3046767 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  AAHT64_RS15795 (AAHT64_15795) yfhJ 3046912..3047181 (-) 270 WP_003243789.1 YfhJ family protein -
  AAHT64_RS15800 (AAHT64_15800) sspK 3047306..3047458 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AAHT64_RS15805 (AAHT64_15805) yfhI 3047491..3048684 (-) 1194 WP_003243500.1 MFS transporter -
  AAHT64_RS15810 (AAHT64_15810) yfhH 3048827..3049141 (-) 315 WP_003244592.1 YfhH family protein -
  AAHT64_RS15815 (AAHT64_15815) recX 3049143..3049937 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  AAHT64_RS15820 (AAHT64_15820) yfhF 3050026..3050937 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  AAHT64_RS15825 (AAHT64_15825) yfhE 3050992..3051102 (+) 111 WP_003223230.1 YfhE family protein -
  AAHT64_RS15830 (AAHT64_15830) yfhD 3051169..3051360 (+) 192 WP_003233561.1 YfhD family protein -
  AAHT64_RS15835 (AAHT64_15835) yfhC 3051399..3051983 (-) 585 WP_003243940.1 nitroreductase -
  AAHT64_RS15840 (AAHT64_15840) yfhB 3052071..3052952 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  AAHT64_RS15845 (AAHT64_15845) sxzA 3053067..3054098 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=995876 AAHT64_RS15815 WP_003243354.1 3049143..3049937(-) (recX) [Bacillus subtilis subsp. subtilis strain R38]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=995876 AAHT64_RS15815 WP_003243354.1 3049143..3049937(-) (recX) [Bacillus subtilis subsp. subtilis strain R38]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment