Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAHT64_RS12665 Genome accession   NZ_CP155054
Coordinates   2479220..2479795 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2474220..2484795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS12640 (AAHT64_12640) mobB 2474616..2475137 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAHT64_RS12645 (AAHT64_12645) glp 2475098..2476390 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  AAHT64_RS12650 (AAHT64_12650) moeB 2476408..2477427 (-) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  AAHT64_RS12655 (AAHT64_12655) mobA 2477478..2478077 (-) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  AAHT64_RS12660 (AAHT64_12660) cse15 2478214..2479179 (+) 966 WP_003245018.1 spore protein Cse15 -
  AAHT64_RS12665 (AAHT64_12665) rok 2479220..2479795 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AAHT64_RS12670 (AAHT64_12670) ykuV 2480261..2480707 (-) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  AAHT64_RS12675 (AAHT64_12675) ahpA 2480779..2481321 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AAHT64_RS12680 (AAHT64_12680) mscT 2481558..2482361 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AAHT64_RS12685 (AAHT64_12685) ykuS 2482398..2482643 (-) 246 WP_003232382.1 YkuS family protein -
  AAHT64_RS12690 (AAHT64_12690) dapI 2482705..2483829 (-) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  AAHT64_RS12695 (AAHT64_12695) dapD 2483899..2484609 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=995858 AAHT64_RS12665 WP_003232378.1 2479220..2479795(-) (rok) [Bacillus subtilis subsp. subtilis strain R38]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=995858 AAHT64_RS12665 WP_003232378.1 2479220..2479795(-) (rok) [Bacillus subtilis subsp. subtilis strain R38]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment