Detailed information NTG0995823

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AAHT64_RS02830
• Genome accession: NZ_CP155054
• Coordinates: 561181..561774 (-)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis subsp. subtilis strain R38
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 556181..566774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT64_RS02815 (AAHT64_02815)	mdxK	556507..558780 (+)	2274	WP_019712404.1	maltose phosphorylase	-
AAHT64_RS02820 (AAHT64_02820)	malL	558773..560458 (+)	1686	WP_003243333.1	oligo-1,6-glucosidase	-
AAHT64_RS02825 (AAHT64_02825)	pgmB	560455..561135 (+)	681	WP_003228210.1	beta-phosphoglucomutase	-
AAHT64_RS02830 (AAHT64_02830)	clpP	561181..561774 (-)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AAHT64_RS02840 (AAHT64_02840)	cotR	562404..563366 (-)	963	WP_003243674.1	sporulation hydrolase CotR	-
AAHT64_RS02845 (AAHT64_02845)	cotNP	563722..565065 (+)	1344	WP_003228217.1	FAD-binding oxidoreductase	-
AAHT64_RS02850 (AAHT64_02850)	yvdQ	565317..565829 (+)	513	WP_003243249.1	DUF3231 family protein	-
AAHT64_RS02855 (AAHT64_02855)	psmB	565865..566185 (-)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
AAHT64_RS02860 (AAHT64_02860)	psmA	566185..566520 (-)	336	WP_003242480.1	SMR family transporter	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=995823 AAHT64_RS02830 WP_003228214.1 561181..561774(-) (clpP) [Bacillus subtilis subsp. subtilis strain R38]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=995823 AAHT64_RS02830 WP_003228214.1 561181..561774(-) (clpP) [Bacillus subtilis subsp. subtilis strain R38]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538