Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AAVB50_RS22040 | Genome accession | NZ_CP154923 |
| Coordinates | 4146517..4146966 (+) | Length | 149 a.a. |
| NCBI ID | WP_033883649.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain FUA2233 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 4141517..4151966
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVB50_RS22015 (AAVB50_22010) | - | 4142205..4142462 (+) | 258 | WP_345806536.1 | hypothetical protein | - |
| AAVB50_RS22020 (AAVB50_22015) | hxlR | 4142728..4143090 (-) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
| AAVB50_RS22025 (AAVB50_22020) | hxlA | 4143322..4143954 (+) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| AAVB50_RS22030 (AAVB50_22025) | hxlB | 4143960..4144517 (+) | 558 | WP_038428343.1 | 6-phospho-3-hexuloisomerase | - |
| AAVB50_RS22035 (AAVB50_22030) | tlpC | 4144628..4146349 (+) | 1722 | WP_192858189.1 | methyl-accepting chemotaxis protein TlpC | - |
| AAVB50_RS22040 (AAVB50_22035) | nucA/comI | 4146517..4146966 (+) | 450 | WP_033883649.1 | DNA-entry nuclease | Machinery gene |
| AAVB50_RS22045 (AAVB50_22040) | nin/comJ | 4146993..4147391 (+) | 399 | WP_015252845.1 | DNA-entry nuclease inhibitor | Regulator |
| AAVB50_RS22050 (AAVB50_22045) | bglC | 4147428..4148861 (-) | 1434 | WP_345805643.1 | 6-phospho-beta-glucosidase | - |
| AAVB50_RS22055 (AAVB50_22050) | yckD | 4149014..4149346 (-) | 333 | WP_015252849.1 | YckD family protein | - |
| AAVB50_RS22060 (AAVB50_22055) | yckC | 4149428..4149884 (-) | 457 | Protein_4277 | RDD family protein | - |
| AAVB50_RS22065 (AAVB50_22060) | - | 4149903..4150100 (-) | 198 | WP_119122841.1 | hypothetical protein | - |
| AAVB50_RS22070 (AAVB50_22065) | yckB | 4150262..4151125 (+) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| AAVB50_RS22075 (AAVB50_22070) | yckA | 4151135..4151815 (+) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16454.42 Da Isoelectric Point: 4.5282
>NTDB_id=995573 AAVB50_RS22040 WP_033883649.1 4146517..4146966(+) (nucA/comI) [Bacillus subtilis strain FUA2233]
MNITTDIIKTILLVIVIIAAAAIGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAIGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=995573 AAVB50_RS22040 WP_033883649.1 4146517..4146966(+) (nucA/comI) [Bacillus subtilis strain FUA2233]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTATCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTATCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
97.987 |
100 |
0.98 |