Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAVB50_RS15925 Genome accession   NZ_CP154923
Coordinates   2991783..2992358 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2233     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2986783..2997358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB50_RS15900 (AAVB50_15895) mobB 2987179..2987700 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAVB50_RS15905 (AAVB50_15900) glp 2987661..2988953 (-) 1293 WP_224912839.1 gephyrin-like molybdotransferase Glp -
  AAVB50_RS15910 (AAVB50_15905) moeB 2988971..2989990 (-) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  AAVB50_RS15915 (AAVB50_15910) mobA 2990041..2990640 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  AAVB50_RS15920 (AAVB50_15915) cse15 2990777..2991742 (+) 966 WP_174223274.1 spore protein Cse15 -
  AAVB50_RS15925 (AAVB50_15920) rok 2991783..2992358 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AAVB50_RS15930 (AAVB50_15925) ykuV 2992824..2993270 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  AAVB50_RS15935 (AAVB50_15930) ahpA 2993342..2993884 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AAVB50_RS15940 (AAVB50_15935) mscT 2994121..2994924 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AAVB50_RS15945 (AAVB50_15940) ykuS 2994961..2995206 (-) 246 WP_003232382.1 YkuS family protein -
  AAVB50_RS15950 (AAVB50_15945) dapI 2995268..2996392 (-) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  AAVB50_RS15955 (AAVB50_15950) dapD 2996462..2997172 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=995549 AAVB50_RS15925 WP_003232378.1 2991783..2992358(-) (rok) [Bacillus subtilis strain FUA2233]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=995549 AAVB50_RS15925 WP_003232378.1 2991783..2992358(-) (rok) [Bacillus subtilis strain FUA2233]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCTGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment