Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   AAVB74_RS22230 Genome accession   NZ_CP154920
Coordinates   4192620..4192760 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain FUA2232     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 4187620..4197760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB74_RS22225 (AAVB74_22225) - 4191502..4192674 (-) 1173 Protein_4340 condensation domain-containing protein -
  AAVB74_RS22230 (AAVB74_22230) comS 4192620..4192760 (-) 141 WP_010886404.1 competence protein ComS Regulator
  AAVB74_RS22235 (AAVB74_22235) srfAB 4192804..4195896 (-) 3093 Protein_4342 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=995495 AAVB74_RS22230 WP_010886404.1 4192620..4192760(-) (comS) [Bacillus subtilis strain FUA2232]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=995495 AAVB74_RS22230 WP_010886404.1 4192620..4192760(-) (comS) [Bacillus subtilis strain FUA2232]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment