Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AAVB74_RS19340 Genome accession   NZ_CP154920
Coordinates   3630002..3630796 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2232     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3625002..3635796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB74_RS19305 (AAVB74_19305) ephM 3625845..3626705 (-) 861 WP_076458543.1 epoxide hydrolase EphM -
  AAVB74_RS19310 (AAVB74_19310) spdL 3626692..3627024 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  AAVB74_RS19315 (AAVB74_19315) yfhK 3627109..3627627 (-) 519 WP_345805504.1 SH3 domain-containing protein -
  AAVB74_RS19320 (AAVB74_19320) yfhJ 3627772..3628041 (-) 270 WP_015252516.1 YfhJ family protein -
  AAVB74_RS19325 (AAVB74_19325) sspK 3628166..3628318 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AAVB74_RS19330 (AAVB74_19330) yfhI 3628350..3629543 (-) 1194 WP_003243500.1 MFS transporter -
  AAVB74_RS19335 (AAVB74_19335) yfhH 3629686..3630000 (-) 315 WP_003244592.1 YfhH family protein -
  AAVB74_RS19340 (AAVB74_19340) recX 3630002..3630796 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  AAVB74_RS19345 (AAVB74_19345) yfhF 3630885..3631796 (+) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  AAVB74_RS19350 (AAVB74_19350) yfhE 3631851..3631961 (+) 111 WP_003223230.1 YfhE family protein -
  AAVB74_RS19355 (AAVB74_19355) yfhD 3632028..3632219 (+) 192 WP_003233561.1 YfhD family protein -
  AAVB74_RS19360 (AAVB74_19360) yfhC 3632258..3632842 (-) 585 WP_003243940.1 nitroreductase -
  AAVB74_RS19365 (AAVB74_19365) yfhB 3632930..3633811 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  AAVB74_RS19370 (AAVB74_19370) sxzA 3633926..3634957 (-) 1032 WP_029317459.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=995490 AAVB74_RS19340 WP_029726844.1 3630002..3630796(-) (recX) [Bacillus subtilis strain FUA2232]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=995490 AAVB74_RS19340 WP_029726844.1 3630002..3630796(-) (recX) [Bacillus subtilis strain FUA2232]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment