Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   AAVB74_RS17695 Genome accession   NZ_CP154920
Coordinates   3325440..3326591 (-) Length   383 a.a.
NCBI ID   WP_167408053.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2232     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3320440..3331591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB74_RS17670 (AAVB74_17670) cwlQ 3320579..3321313 (+) 735 WP_282913503.1 bifunctional muramidase/murein lytic transglycosylase -
  AAVB74_RS17675 (AAVB74_17675) yjbI 3321568..3321966 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  AAVB74_RS17680 (AAVB74_17680) spxH 3321963..3322862 (+) 900 WP_024573348.1 protease adaptor protein SpxH -
  AAVB74_RS17685 (AAVB74_17685) - 3323176..3323343 (+) 168 WP_003244944.1 hypothetical protein -
  AAVB74_RS17690 (AAVB74_17690) pepF 3323381..3325210 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  AAVB74_RS17695 (AAVB74_17695) coiA 3325440..3326591 (-) 1152 WP_167408053.1 competence protein CoiA Machinery gene
  AAVB74_RS17700 (AAVB74_17700) - 3326635..3326756 (+) 122 Protein_3469 hypothetical protein -
  AAVB74_RS17705 (AAVB74_17705) mecA 3326751..3327407 (-) 657 WP_015383354.1 adaptor protein MecA Regulator
  AAVB74_RS17710 (AAVB74_17710) - 3327374..3327514 (-) 141 WP_121572562.1 hypothetical protein -
  AAVB74_RS17715 (AAVB74_17715) yjbE 3327684..3328340 (+) 657 WP_003232944.1 TerC family protein -
  AAVB74_RS17720 (AAVB74_17720) spx 3328383..3328778 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  AAVB74_RS17725 (AAVB74_17725) yjbC 3328959..3329537 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  AAVB74_RS17730 (AAVB74_17730) yjbB 3329701..3330918 (-) 1218 WP_088467689.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=995477 AAVB74_RS17695 WP_167408053.1 3325440..3326591(-) (coiA) [Bacillus subtilis strain FUA2232]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFIRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=995477 AAVB74_RS17695 WP_167408053.1 3325440..3326591(-) (coiA) [Bacillus subtilis strain FUA2232]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTTTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTATCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAATTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGTGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961


Multiple sequence alignment