Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAVB74_RS16155 Genome accession   NZ_CP154920
Coordinates   3056288..3056863 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2232     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3051288..3061863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB74_RS16130 (AAVB74_16130) mobB 3051684..3052205 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAVB74_RS16135 (AAVB74_16135) glp 3052166..3053458 (-) 1293 WP_224912839.1 gephyrin-like molybdotransferase Glp -
  AAVB74_RS16140 (AAVB74_16140) moeB 3053476..3054495 (-) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  AAVB74_RS16145 (AAVB74_16145) mobA 3054546..3055145 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  AAVB74_RS16150 (AAVB74_16150) cse15 3055282..3056247 (+) 966 WP_174223274.1 spore protein Cse15 -
  AAVB74_RS16155 (AAVB74_16155) rok 3056288..3056863 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AAVB74_RS16160 (AAVB74_16160) ykuV 3057329..3057775 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  AAVB74_RS16165 (AAVB74_16165) ahpA 3057847..3058389 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AAVB74_RS16170 (AAVB74_16170) mscT 3058626..3059429 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AAVB74_RS16175 (AAVB74_16175) ykuS 3059466..3059711 (-) 246 WP_003232382.1 YkuS family protein -
  AAVB74_RS16180 (AAVB74_16180) dapI 3059773..3060897 (-) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  AAVB74_RS16185 (AAVB74_16185) dapD 3060967..3061677 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=995472 AAVB74_RS16155 WP_003232378.1 3056288..3056863(-) (rok) [Bacillus subtilis strain FUA2232]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=995472 AAVB74_RS16155 WP_003232378.1 3056288..3056863(-) (rok) [Bacillus subtilis strain FUA2232]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCTGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment