Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   AAVB74_RS10155 Genome accession   NZ_CP154920
Coordinates   1897629..1898396 (+) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus subtilis strain FUA2232     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 1892629..1903396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB74_RS10125 (AAVB74_10125) pgpH 1892925..1895060 (+) 2136 WP_010886570.1 cyclic-di-AMP phosphodiesterase PgpH -
  AAVB74_RS10130 (AAVB74_10130) ybeY 1895061..1895534 (+) 474 WP_024572410.1 rRNA maturation RNase YbeY -
  AAVB74_RS10135 (AAVB74_10135) unpK 1895515..1895886 (+) 372 WP_015384119.1 diacylglycerol kinase family protein -
  AAVB74_RS10140 (AAVB74_10140) cdd 1896005..1896415 (+) 411 WP_003230049.1 cytidine deaminase -
  AAVB74_RS10145 (AAVB74_10145) era 1896396..1897301 (+) 906 WP_024572411.1 GTPase Era -
  AAVB74_RS10150 (AAVB74_10150) yqzL 1897449..1897592 (+) 144 WP_003230053.1 YqzL family protein -
  AAVB74_RS10155 (AAVB74_10155) recO 1897629..1898396 (+) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  AAVB74_RS10160 (AAVB74_10160) glyQ 1898694..1899581 (+) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  AAVB74_RS10165 (AAVB74_10165) glyS 1899574..1901613 (+) 2040 WP_345806067.1 glycine--tRNA ligase subunit beta -
  AAVB74_RS10170 (AAVB74_10170) ccpN 1901746..1902384 (+) 639 WP_003237058.1 transcriptional regulator CcpN -
  AAVB74_RS10175 (AAVB74_10175) ppsR 1902410..1903222 (+) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=995453 AAVB74_RS10155 WP_014477369.1 1897629..1898396(+) (recO) [Bacillus subtilis strain FUA2232]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=995453 AAVB74_RS10155 WP_014477369.1 1897629..1898396(+) (recO) [Bacillus subtilis strain FUA2232]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACATTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTTTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATTAA
ACCACAAACGGCAAGGCTGTTAAGACTCTTCTACTATTTTGATTTGTCGAGACTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment