Detailed information NTG0995424

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAVB74_RS00935
• Genome accession: NZ_CP154920
• Coordinates: 161095..162207 (-)
• Length: 370 a.a.
• NCBI ID: WP_043858426.1
• Uniprot ID: A0A0D1KVD0
• Organism: Bacillus subtilis strain FUA2232
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 156095..167207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB74_RS00920 (AAVB74_00920)	gyrA	156185..158650 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
AAVB74_RS00925 (AAVB74_00925)	gyrB	158861..160777 (-)	1917	WP_345806529.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AAVB74_RS00930 (AAVB74_00930)	remB	160832..161077 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
AAVB74_RS00935 (AAVB74_00935)	recF	161095..162207 (-)	1113	WP_043858426.1	DNA replication/repair protein RecF	Machinery gene
AAVB74_RS00940 (AAVB74_00940)	rlbA	162223..162438 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
AAVB74_RS00945 (AAVB74_00945)	dnaN	162569..163705 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
AAVB74_RS00950 (AAVB74_00950)	dnaA	163894..165234 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
AAVB74_RS00955 (AAVB74_00955)	rpmH	165861..165995 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AAVB74_RS00960 (AAVB74_00960)	rnpA	166147..166497 (+)	351	WP_003242628.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42334.41 Da
• Isoelectric Point: 7.3661

>NTDB_id=995424 AAVB74_RS00935 WP_043858426.1 161095..162207(-) (recF) [Bacillus subtilis strain FUA2232]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSLVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALEVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=995424 AAVB74_RS00935 WP_043858426.1 161095..162207(-) (recF) [Bacillus subtilis strain FUA2232]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCTCGTCTACCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGAGGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

3D structure

• AlphaFold DB: A0A0D1KVD0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995