Detailed information NTG0995403

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAYR29_RS17910
• Genome accession: NZ_CP154918
• Coordinates: 3326034..3327146 (-)
• Length: 370 a.a.
• NCBI ID: WP_043858426.1
• Uniprot ID: A0A0D1KVD0
• Organism: Bacillus subtilis strain FUA2231
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3321034..3332146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR29_RS17895 (AAYR29_17895)	gyrA	3321124..3323589 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
AAYR29_RS17900 (AAYR29_17900)	gyrB	3323800..3325716 (-)	1917	WP_345806529.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AAYR29_RS17905 (AAYR29_17905)	remB	3325771..3326016 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
AAYR29_RS17910 (AAYR29_17910)	recF	3326034..3327146 (-)	1113	WP_043858426.1	DNA replication/repair protein RecF	Machinery gene
AAYR29_RS17915 (AAYR29_17915)	rlbA	3327162..3327377 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
AAYR29_RS17920 (AAYR29_17920)	dnaN	3327508..3328644 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
AAYR29_RS17925 (AAYR29_17925)	dnaA	3328833..3330173 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
AAYR29_RS17930 (AAYR29_17930)	rpmH	3330800..3330934 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AAYR29_RS17935 (AAYR29_17935)	rnpA	3331086..3331436 (+)	351	WP_003242628.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42334.41 Da
• Isoelectric Point: 7.3661

>NTDB_id=995403 AAYR29_RS17910 WP_043858426.1 3326034..3327146(-) (recF) [Bacillus subtilis strain FUA2231]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSLVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALEVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=995403 AAYR29_RS17910 WP_043858426.1 3326034..3327146(-) (recF) [Bacillus subtilis strain FUA2231]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCTCGTCTACCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGAGGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

3D structure

• AlphaFold DB: A0A0D1KVD0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995