Detailed information NTG0995382

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AAYR29_RS11070
• Genome accession: NZ_CP154918
• Coordinates: 2038602..2039555 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain FUA2231
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2033602..2044555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR29_RS11040 (AAYR29_11040)	appD	2033721..2034707 (-)	987	WP_198878863.1	oligopeptide ABC transporter ATP-binding protein AppD	-
AAYR29_RS11045 (AAYR29_11045)	yjaZ	2034899..2035684 (-)	786	WP_077670617.1	DUF2268 domain-containing protein	-
AAYR29_RS11050 (AAYR29_11050)	fabF	2035760..2037001 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AAYR29_RS11055 (AAYR29_11055)	fabH	2037024..2037962 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AAYR29_RS11060 (AAYR29_11060)	yjzB	2038127..2038366 (+)	240	WP_003232972.1	spore coat protein YjzB	-
AAYR29_RS11065 (AAYR29_11065)	comZ	2038396..2038587 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AAYR29_RS11070 (AAYR29_11070)	med	2038602..2039555 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
AAYR29_RS11075 (AAYR29_11075)	-	2039645..2040202 (-)	558	WP_014479435.1	hypothetical protein	-
AAYR29_RS11080 (AAYR29_11080)	-	2040284..2041018 (-)	735	WP_032721340.1	hypothetical protein	-
AAYR29_RS11085 (AAYR29_11085)	yjzD	2041267..2041452 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AAYR29_RS11090 (AAYR29_11090)	yjzC	2041499..2041678 (-)	180	WP_003245356.1	YjzC family protein	-
AAYR29_RS11095 (AAYR29_11095)	argF	2041763..2042722 (-)	960	WP_198878861.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=995382 AAYR29_RS11070 WP_014476425.1 2038602..2039555(-) (med) [Bacillus subtilis strain FUA2231]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=995382 AAYR29_RS11070 WP_014476425.1 2038602..2039555(-) (med) [Bacillus subtilis strain FUA2231]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997