Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AAYR29_RS09505 Genome accession   NZ_CP154918
Coordinates   1762025..1762489 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain FUA2231     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1757025..1767489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS09485 (AAYR29_09485) fadH 1758213..1758977 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  AAYR29_RS09490 (AAYR29_09490) ppeE 1759120..1759980 (+) 861 WP_224912829.1 metallophosphoesterase -
  AAYR29_RS09495 (AAYR29_09495) ltdD 1760037..1760531 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  AAYR29_RS09500 (AAYR29_09500) ykuC 1760607..1761899 (+) 1293 WP_224912827.1 MFS transporter -
  AAYR29_RS09505 (AAYR29_09505) kre 1762025..1762489 (+) 465 WP_003232406.1 YkyB family protein Regulator
  AAYR29_RS09510 (AAYR29_09510) cheV 1762533..1763444 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  AAYR29_RS09515 (AAYR29_09515) - 1763648..1763809 (+) 162 WP_003245246.1 hypothetical protein -
  AAYR29_RS09520 (AAYR29_09520) dapX 1764011..1765192 (+) 1182 WP_014479654.1 aminotransferase A -
  AAYR29_RS09525 (AAYR29_09525) kinA 1765203..1767023 (-) 1821 WP_198878747.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=995373 AAYR29_RS09505 WP_003232406.1 1762025..1762489(+) (kre) [Bacillus subtilis strain FUA2231]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=995373 AAYR29_RS09505 WP_003232406.1 1762025..1762489(+) (kre) [Bacillus subtilis strain FUA2231]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment