Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAYR29_RS09405 Genome accession   NZ_CP154918
Coordinates   1745999..1746574 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2231     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1740999..1751574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS09380 (AAYR29_09380) mobB 1741395..1741916 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAYR29_RS09385 (AAYR29_09385) glp 1741877..1743169 (-) 1293 WP_224912839.1 gephyrin-like molybdotransferase Glp -
  AAYR29_RS09390 (AAYR29_09390) moeB 1743187..1744206 (-) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  AAYR29_RS09395 (AAYR29_09395) mobA 1744257..1744856 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  AAYR29_RS09400 (AAYR29_09400) cse15 1744993..1745958 (+) 966 WP_174223274.1 spore protein Cse15 -
  AAYR29_RS09405 (AAYR29_09405) rok 1745999..1746574 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AAYR29_RS09410 (AAYR29_09410) ykuV 1747040..1747486 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  AAYR29_RS09415 (AAYR29_09415) ahpA 1747558..1748100 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AAYR29_RS09420 (AAYR29_09420) mscT 1748337..1749140 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AAYR29_RS09425 (AAYR29_09425) ykuS 1749177..1749422 (-) 246 WP_003232382.1 YkuS family protein -
  AAYR29_RS09430 (AAYR29_09430) dapI 1749484..1750608 (-) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  AAYR29_RS09435 (AAYR29_09435) dapD 1750678..1751388 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=995372 AAYR29_RS09405 WP_003232378.1 1745999..1746574(-) (rok) [Bacillus subtilis strain FUA2231]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=995372 AAYR29_RS09405 WP_003232378.1 1745999..1746574(-) (rok) [Bacillus subtilis strain FUA2231]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCTGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment