Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AAVC46_RS14440 | Genome accession | NZ_CP154913 |
| Coordinates | 2774781..2775071 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain FUA2119 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2769781..2780071
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC46_RS14400 (AAVC46_14400) | - | 2769816..2770145 (+) | 330 | WP_024425625.1 | cyclic-di-AMP receptor | - |
| AAVC46_RS14405 (AAVC46_14405) | - | 2770158..2770598 (+) | 441 | WP_034665673.1 | DUF327 family protein | - |
| AAVC46_RS14410 (AAVC46_14410) | holB | 2770610..2771599 (+) | 990 | WP_106037503.1 | DNA polymerase III subunit delta' | - |
| AAVC46_RS14415 (AAVC46_14415) | - | 2771602..2772429 (+) | 828 | WP_012008643.1 | stage 0 sporulation family protein | - |
| AAVC46_RS14420 (AAVC46_14420) | yabA | 2772444..2772797 (+) | 354 | WP_003217957.1 | DNA replication initiation control protein YabA | - |
| AAVC46_RS14425 (AAVC46_14425) | - | 2772853..2773596 (+) | 744 | WP_340974231.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AAVC46_RS14430 (AAVC46_14430) | - | 2773583..2773879 (+) | 297 | WP_307498816.1 | GIY-YIG nuclease family protein | - |
| AAVC46_RS14435 (AAVC46_14435) | rsmI | 2773857..2774735 (+) | 879 | WP_334750982.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AAVC46_RS14440 (AAVC46_14440) | abrB | 2774781..2775071 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| AAVC46_RS14445 (AAVC46_14445) | metG | 2775592..2777592 (+) | 2001 | WP_345820626.1 | methionine--tRNA ligase | - |
| AAVC46_RS14450 (AAVC46_14450) | - | 2777674..2778441 (+) | 768 | WP_345820628.1 | TatD family hydrolase | - |
| AAVC46_RS14455 (AAVC46_14455) | - | 2778686..2779888 (+) | 1203 | WP_340974237.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=995335 AAVC46_RS14440 WP_087975202.1 2774781..2775071(-) (abrB) [Bacillus pumilus strain FUA2119]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=995335 AAVC46_RS14440 WP_087975202.1 2774781..2775071(-) (abrB) [Bacillus pumilus strain FUA2119]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |