Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAVC46_RS02450 Genome accession   NZ_CP154913
Coordinates   462757..463338 (+) Length   193 a.a.
NCBI ID   WP_034662739.1    Uniprot ID   A0AAE3WHV4
Organism   Bacillus pumilus strain FUA2119     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 457757..468338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC46_RS02420 (AAVC46_02420) dapD 457865..458575 (+) 711 WP_345821327.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AAVC46_RS02425 (AAVC46_02425) - 458660..459790 (+) 1131 WP_187704478.1 N-acetyldiaminopimelate deacetylase -
  AAVC46_RS02430 (AAVC46_02430) - 459841..460083 (+) 243 WP_003211408.1 YkuS family protein -
  AAVC46_RS02435 (AAVC46_02435) - 460110..460919 (-) 810 WP_034662747.1 mechanosensitive ion channel family protein -
  AAVC46_RS02440 (AAVC46_02440) ahpA 461192..461734 (+) 543 WP_345821333.1 biofilm-specific peroxidase AhpA -
  AAVC46_RS02445 (AAVC46_02445) - 461817..462275 (+) 459 WP_034662741.1 TlpA disulfide reductase family protein -
  AAVC46_RS02450 (AAVC46_02450) rok 462757..463338 (+) 582 WP_034662739.1 hypothetical protein Regulator
  AAVC46_RS02455 (AAVC46_02455) - 463387..464304 (-) 918 WP_334748872.1 sigmaE regulated sporulation protein -
  AAVC46_RS02460 (AAVC46_02460) - 464389..464970 (+) 582 WP_334748874.1 molybdenum cofactor guanylyltransferase -
  AAVC46_RS02465 (AAVC46_02465) - 465000..466016 (+) 1017 WP_345821337.1 thiazole biosynthesis adenylyltransferase ThiF -
  AAVC46_RS02470 (AAVC46_02470) glp 466026..467303 (+) 1278 WP_345821340.1 gephyrin-like molybdotransferase Glp -
  AAVC46_RS02475 (AAVC46_02475) mobB 467285..467809 (+) 525 WP_345821343.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAVC46_RS02480 (AAVC46_02480) - 467806..468297 (+) 492 WP_106041755.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21812.80 Da        Isoelectric Point: 9.7309

>NTDB_id=995296 AAVC46_RS02450 WP_034662739.1 462757..463338(+) (rok) [Bacillus pumilus strain FUA2119]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQP
PAQSQSNPASSLGTGQLNGVPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=995296 AAVC46_RS02450 WP_034662739.1 462757..463338(+) (rok) [Bacillus pumilus strain FUA2119]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAACTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAAAGAAAGACGGATTCGCTGCCTGTATTAGCTGAACTGGCTGCACAAGAAATGAGAAGCTACCAGCCG
CCGGCACAATCACAATCAAATCCTGCATCATCTTTAGGAACAGGACAGCTAAACGGTGTACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCTAAGCTTCGTGAAGCTGCGATTAAAACGTTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAGCTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

78.421

98.446

0.772

Multiple sequence alignment