Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AAVC46_RS00835 | Genome accession | NZ_CP154913 |
| Coordinates | 154938..155516 (+) | Length | 192 a.a. |
| NCBI ID | WP_340972273.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain FUA2119 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 149938..160516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC46_RS00815 (AAVC46_00815) | - | 150430..151725 (-) | 1296 | WP_034663533.1 | globin-coupled sensor protein | - |
| AAVC46_RS00820 (AAVC46_00820) | - | 151817..153349 (-) | 1533 | WP_340972271.1 | FAD-dependent oxidoreductase | - |
| AAVC46_RS00825 (AAVC46_00825) | - | 153495..154355 (+) | 861 | WP_060595936.1 | SDR family oxidoreductase | - |
| AAVC46_RS00830 (AAVC46_00830) | - | 154412..154648 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| AAVC46_RS00835 (AAVC46_00835) | comK | 154938..155516 (+) | 579 | WP_340972273.1 | competence protein ComK | Regulator |
| AAVC46_RS00840 (AAVC46_00840) | - | 155685..156791 (+) | 1107 | WP_334748533.1 | D-TA family PLP-dependent enzyme | - |
| AAVC46_RS00845 (AAVC46_00845) | - | 157146..157628 (+) | 483 | WP_060595940.1 | hypothetical protein | - |
| AAVC46_RS00850 (AAVC46_00850) | - | 157661..159100 (-) | 1440 | WP_340972280.1 | PLP-dependent aminotransferase family protein | - |
| AAVC46_RS00855 (AAVC46_00855) | - | 159245..160414 (+) | 1170 | WP_340972282.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22334.41 Da Isoelectric Point: 8.7962
>NTDB_id=995283 AAVC46_RS00835 WP_340972273.1 154938..155516(+) (comK) [Bacillus pumilus strain FUA2119]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
Nucleotide
Download Length: 579 bp
>NTDB_id=995283 AAVC46_RS00835 WP_340972273.1 154938..155516(+) (comK) [Bacillus pumilus strain FUA2119]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGGA
GCTGCAGATTCTTCGGCTCAAGCTATGCGGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCTCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATTTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAAATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGGA
GCTGCAGATTCTTCGGCTCAAGCTATGCGGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCTCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATTTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAAATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |