Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAYR27_RS16565 Genome accession   NZ_CP154912
Coordinates   3229476..3230048 (-) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain FUA2118     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3224476..3235048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR27_RS16535 (AAYR27_16535) - 3224517..3225008 (-) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -
  AAYR27_RS16540 (AAYR27_16540) mobB 3225005..3225529 (-) 525 WP_065214461.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAYR27_RS16545 (AAYR27_16545) glp 3225511..3226788 (-) 1278 WP_065214313.1 gephyrin-like molybdotransferase Glp -
  AAYR27_RS16550 (AAYR27_16550) - 3226798..3227814 (-) 1017 WP_061109774.1 thiazole biosynthesis adenylyltransferase ThiF -
  AAYR27_RS16555 (AAYR27_16555) - 3227844..3228425 (-) 582 WP_065214312.1 molybdenum cofactor guanylyltransferase -
  AAYR27_RS16560 (AAYR27_16560) - 3228511..3229428 (+) 918 WP_065214311.1 sigmaE regulated sporulation protein -
  AAYR27_RS16565 (AAYR27_16565) rok 3229476..3230048 (-) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  AAYR27_RS16570 (AAYR27_16570) - 3230530..3230988 (-) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  AAYR27_RS16575 (AAYR27_16575) ahpA 3231071..3231613 (-) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  AAYR27_RS16580 (AAYR27_16580) - 3231885..3232694 (+) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  AAYR27_RS16585 (AAYR27_16585) - 3232717..3232959 (-) 243 WP_284383965.1 YkuS family protein -
  AAYR27_RS16590 (AAYR27_16590) - 3233010..3234140 (-) 1131 WP_284382991.1 N-acetyldiaminopimelate deacetylase -
  AAYR27_RS16595 (AAYR27_16595) dapD 3234222..3234932 (-) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=995263 AAYR27_RS16565 WP_024426871.1 3229476..3230048(-) (rok) [Bacillus safensis strain FUA2118]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=995263 AAYR27_RS16565 WP_024426871.1 3229476..3230048(-) (rok) [Bacillus safensis strain FUA2118]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCGCCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATTCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment